Gene : Carub.0006s2966 C. rubella v1.1
Defline:  (1 of 1) PF02229//PF08766 - Transcriptional Coactivator p15 (PC4) (PC4) // DEK C terminal domain (DEK_C) Genomic Order:  2966
Name:  ? Carub.0006s2966 Secondary Identifier:  ? PAC:39246501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2966 0.5kb upstream 0.5kb upstream 1898 true scaffold_6: 13452132-13454029 Capsella rubella
Carub.0006s2966 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13453530-13454029 Capsella rubella
Carub.0006s2966 0.5kb downstream 0.5kb downstream 1898 true scaffold_6: 13451632-13453529 Capsella rubella
Carub.0006s2966 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13451632-13452131 Capsella rubella
Carub.0006s2966 1.0kb upstream 1.0kb upstream 2398 true scaffold_6: 13452132-13454529 Capsella rubella
Carub.0006s2966 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13453530-13454529 Capsella rubella
Carub.0006s2966 1.0kb downstream 1.0kb downstream 2398 true scaffold_6: 13451132-13453529 Capsella rubella
Carub.0006s2966 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13451132-13452131 Capsella rubella
Carub.0006s2966 2.0kb upstream 2.0kb upstream 3398 true scaffold_6: 13452132-13455529 Capsella rubella
Carub.0006s2966 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13453530-13455529 Capsella rubella
Carub.0006s2966 2.0kb downstream 2.0kb downstream 3398 true scaffold_6: 13450132-13453529 Capsella rubella
Carub.0006s2966 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13450132-13452131 Capsella rubella
Carub.0006s2966 5.0kb upstream 5.0kb upstream 6398 true scaffold_6: 13452132-13458529 Capsella rubella
Carub.0006s2966 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13453530-13458529 Capsella rubella
Carub.0006s2966 5.0kb downstream 5.0kb downstream 6398 true scaffold_6: 13447132-13453529 Capsella rubella
Carub.0006s2966 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13447132-13452131 Capsella rubella
Carub.0006s2966 10.0kb upstream 10.0kb upstream 11398 true scaffold_6: 13452132-13463529 Capsella rubella
Carub.0006s2966 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13453530-13463529 Capsella rubella
Carub.0006s2966 10.0kb downstream 10.0kb downstream 11398 true scaffold_6: 13442132-13453529 Capsella rubella
Carub.0006s2966 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13442132-13452131 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362680 5261 Brassicaceae View MSA
123841225 5264 Brassicales-Malvales View MSA
124342237 5266 SBM View MSA
124243257 5268 Malvidae View MSA
124066656 5270 Rosid View MSA
123749288 5271 Pentapetalae View MSA
122790546 5272 Eudicot View MSA
122043186 5273 Angiosperm View MSA
121348005 5274 Embryophyte View MSA
123427584 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain