Gene : Carub.0006s2968 C. rubella v1.1

Defline:  (1 of 1) PF00097//PF00628//PF15870 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) // ElonginA binding-protein 1 (EloA-BP1) Genomic Order:  2968
Name:  ? Carub.0006s2968 Secondary Identifier:  ? PAC:39247418

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2968 0.5kb upstream 0.5kb upstream 6922 true scaffold_6: 13456178-13463099 Capsella rubella
Carub.0006s2968 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13462600-13463099 Capsella rubella
Carub.0006s2968 0.5kb downstream 0.5kb downstream 6922 true scaffold_6: 13455678-13462599 Capsella rubella
Carub.0006s2968 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13455678-13456177 Capsella rubella
Carub.0006s2968 1.0kb upstream 1.0kb upstream 7422 true scaffold_6: 13456178-13463599 Capsella rubella
Carub.0006s2968 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13462600-13463599 Capsella rubella
Carub.0006s2968 1.0kb downstream 1.0kb downstream 7422 true scaffold_6: 13455178-13462599 Capsella rubella
Carub.0006s2968 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13455178-13456177 Capsella rubella
Carub.0006s2968 2.0kb upstream 2.0kb upstream 8422 true scaffold_6: 13456178-13464599 Capsella rubella
Carub.0006s2968 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13462600-13464599 Capsella rubella
Carub.0006s2968 2.0kb downstream 2.0kb downstream 8422 true scaffold_6: 13454178-13462599 Capsella rubella
Carub.0006s2968 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13454178-13456177 Capsella rubella
Carub.0006s2968 5.0kb upstream 5.0kb upstream 11422 true scaffold_6: 13456178-13467599 Capsella rubella
Carub.0006s2968 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13462600-13467599 Capsella rubella
Carub.0006s2968 5.0kb downstream 5.0kb downstream 11422 true scaffold_6: 13451178-13462599 Capsella rubella
Carub.0006s2968 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13451178-13456177 Capsella rubella
Carub.0006s2968 10.0kb upstream 10.0kb upstream 16422 true scaffold_6: 13456178-13472599 Capsella rubella
Carub.0006s2968 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13462600-13472599 Capsella rubella
Carub.0006s2968 10.0kb downstream 10.0kb downstream 16422 true scaffold_6: 13446178-13462599 Capsella rubella
Carub.0006s2968 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13446178-13456177 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379374 5261 Brassicaceae View MSA
123829731 5264 Brassicales-Malvales View MSA
124347723 5266 SBM View MSA
124237392 5268 Malvidae View MSA
124061818 5270 Rosid View MSA
123737188 5271 Pentapetalae View MSA
122794309 5272 Eudicot View MSA
122043530 5273 Angiosperm View MSA
121343947 5274 Embryophyte View MSA
123379945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain