Gene : Carub.0006s3059 C. rubella v1.1
Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3059
Name:  ? Carub.0006s3059 Secondary Identifier:  ? PAC:39246339
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3059 0.5kb upstream 0.5kb upstream 2592 true scaffold_6: 13858838-13861429 Capsella rubella
Carub.0006s3059 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13860930-13861429 Capsella rubella
Carub.0006s3059 0.5kb downstream 0.5kb downstream 2592 true scaffold_6: 13858338-13860929 Capsella rubella
Carub.0006s3059 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13858338-13858837 Capsella rubella
Carub.0006s3059 1.0kb upstream 1.0kb upstream 3092 true scaffold_6: 13858838-13861929 Capsella rubella
Carub.0006s3059 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13860930-13861929 Capsella rubella
Carub.0006s3059 1.0kb downstream 1.0kb downstream 3092 true scaffold_6: 13857838-13860929 Capsella rubella
Carub.0006s3059 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13857838-13858837 Capsella rubella
Carub.0006s3059 2.0kb upstream 2.0kb upstream 4092 true scaffold_6: 13858838-13862929 Capsella rubella
Carub.0006s3059 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13860930-13862929 Capsella rubella
Carub.0006s3059 2.0kb downstream 2.0kb downstream 4092 true scaffold_6: 13856838-13860929 Capsella rubella
Carub.0006s3059 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13856838-13858837 Capsella rubella
Carub.0006s3059 5.0kb upstream 5.0kb upstream 7092 true scaffold_6: 13858838-13865929 Capsella rubella
Carub.0006s3059 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13860930-13865929 Capsella rubella
Carub.0006s3059 5.0kb downstream 5.0kb downstream 7092 true scaffold_6: 13853838-13860929 Capsella rubella
Carub.0006s3059 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13853838-13858837 Capsella rubella
Carub.0006s3059 10.0kb upstream 10.0kb upstream 12092 true scaffold_6: 13858838-13870929 Capsella rubella
Carub.0006s3059 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13860930-13870929 Capsella rubella
Carub.0006s3059 10.0kb downstream 10.0kb downstream 12092 true scaffold_6: 13848838-13860929 Capsella rubella
Carub.0006s3059 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13848838-13858837 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378889 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain