Gene : Carub.0006s3070 C. rubella v1.1
Defline:  (1 of 1) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE // SUBFAMILY NOT NAMED Genomic Order:  3070
Name:  ? Carub.0006s3070 Secondary Identifier:  ? PAC:39246183
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4081 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3070 0.5kb upstream 0.5kb upstream 2173 true scaffold_6: 13892262-13894434 Capsella rubella
Carub.0006s3070 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13893935-13894434 Capsella rubella
Carub.0006s3070 0.5kb downstream 0.5kb downstream 2173 true scaffold_6: 13891762-13893934 Capsella rubella
Carub.0006s3070 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13891762-13892261 Capsella rubella
Carub.0006s3070 1.0kb upstream 1.0kb upstream 2673 true scaffold_6: 13892262-13894934 Capsella rubella
Carub.0006s3070 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13893935-13894934 Capsella rubella
Carub.0006s3070 1.0kb downstream 1.0kb downstream 2673 true scaffold_6: 13891262-13893934 Capsella rubella
Carub.0006s3070 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13891262-13892261 Capsella rubella
Carub.0006s3070 2.0kb upstream 2.0kb upstream 3673 true scaffold_6: 13892262-13895934 Capsella rubella
Carub.0006s3070 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13893935-13895934 Capsella rubella
Carub.0006s3070 2.0kb downstream 2.0kb downstream 3673 true scaffold_6: 13890262-13893934 Capsella rubella
Carub.0006s3070 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13890262-13892261 Capsella rubella
Carub.0006s3070 5.0kb upstream 5.0kb upstream 6673 true scaffold_6: 13892262-13898934 Capsella rubella
Carub.0006s3070 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13893935-13898934 Capsella rubella
Carub.0006s3070 5.0kb downstream 5.0kb downstream 6673 true scaffold_6: 13887262-13893934 Capsella rubella
Carub.0006s3070 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13887262-13892261 Capsella rubella
Carub.0006s3070 10.0kb upstream 10.0kb upstream 11673 true scaffold_6: 13892262-13903934 Capsella rubella
Carub.0006s3070 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13893935-13903934 Capsella rubella
Carub.0006s3070 10.0kb downstream 10.0kb downstream 11673 true scaffold_6: 13882262-13893934 Capsella rubella
Carub.0006s3070 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13882262-13892261 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365650 5261 Brassicaceae View MSA
123838420 5264 Brassicales-Malvales View MSA
124336450 5266 SBM View MSA
124242823 5268 Malvidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain