Gene : Carub.0006s3075 C. rubella v1.1
Defline:  (1 of 1) PTHR10015//PTHR10015:SF169 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-2B Genomic Order:  3075
Name:  ? Carub.0006s3075 Secondary Identifier:  ? PAC:39246981
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3075 0.5kb upstream 0.5kb upstream 2699 true scaffold_6: 13915447-13918145 Capsella rubella
Carub.0006s3075 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13915447-13915946 Capsella rubella
Carub.0006s3075 0.5kb downstream 0.5kb downstream 2699 true scaffold_6: 13915947-13918645 Capsella rubella
Carub.0006s3075 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13918146-13918645 Capsella rubella
Carub.0006s3075 1.0kb upstream 1.0kb upstream 3199 true scaffold_6: 13914947-13918145 Capsella rubella
Carub.0006s3075 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13914947-13915946 Capsella rubella
Carub.0006s3075 1.0kb downstream 1.0kb downstream 3199 true scaffold_6: 13915947-13919145 Capsella rubella
Carub.0006s3075 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13918146-13919145 Capsella rubella
Carub.0006s3075 2.0kb upstream 2.0kb upstream 4199 true scaffold_6: 13913947-13918145 Capsella rubella
Carub.0006s3075 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13913947-13915946 Capsella rubella
Carub.0006s3075 2.0kb downstream 2.0kb downstream 4199 true scaffold_6: 13915947-13920145 Capsella rubella
Carub.0006s3075 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13918146-13920145 Capsella rubella
Carub.0006s3075 5.0kb upstream 5.0kb upstream 7199 true scaffold_6: 13910947-13918145 Capsella rubella
Carub.0006s3075 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13910947-13915946 Capsella rubella
Carub.0006s3075 5.0kb downstream 5.0kb downstream 7199 true scaffold_6: 13915947-13923145 Capsella rubella
Carub.0006s3075 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13918146-13923145 Capsella rubella
Carub.0006s3075 10.0kb upstream 10.0kb upstream 12199 true scaffold_6: 13905947-13918145 Capsella rubella
Carub.0006s3075 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13905947-13915946 Capsella rubella
Carub.0006s3075 10.0kb downstream 10.0kb downstream 12199 true scaffold_6: 13915947-13928145 Capsella rubella
Carub.0006s3075 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13918146-13928145 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373232 5261 Brassicaceae View MSA
123832596 5264 Brassicales-Malvales View MSA
124342086 5266 SBM View MSA
124242310 5268 Malvidae View MSA
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain