Gene : Carub.0006s3083 C. rubella v1.1
Defline:  (1 of 4) PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Genomic Order:  3083
Name:  ? Carub.0006s3083 Secondary Identifier:  ? PAC:39247631
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3083 0.5kb upstream 0.5kb upstream 4347 true scaffold_6: 13951669-13956015 Capsella rubella
Carub.0006s3083 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13951669-13952168 Capsella rubella
Carub.0006s3083 0.5kb downstream 0.5kb downstream 4347 true scaffold_6: 13952169-13956515 Capsella rubella
Carub.0006s3083 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13956016-13956515 Capsella rubella
Carub.0006s3083 1.0kb upstream 1.0kb upstream 4847 true scaffold_6: 13951169-13956015 Capsella rubella
Carub.0006s3083 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13951169-13952168 Capsella rubella
Carub.0006s3083 1.0kb downstream 1.0kb downstream 4847 true scaffold_6: 13952169-13957015 Capsella rubella
Carub.0006s3083 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13956016-13957015 Capsella rubella
Carub.0006s3083 2.0kb upstream 2.0kb upstream 5847 true scaffold_6: 13950169-13956015 Capsella rubella
Carub.0006s3083 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13950169-13952168 Capsella rubella
Carub.0006s3083 2.0kb downstream 2.0kb downstream 5847 true scaffold_6: 13952169-13958015 Capsella rubella
Carub.0006s3083 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13956016-13958015 Capsella rubella
Carub.0006s3083 5.0kb upstream 5.0kb upstream 8847 true scaffold_6: 13947169-13956015 Capsella rubella
Carub.0006s3083 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13947169-13952168 Capsella rubella
Carub.0006s3083 5.0kb downstream 5.0kb downstream 8847 true scaffold_6: 13952169-13961015 Capsella rubella
Carub.0006s3083 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13956016-13961015 Capsella rubella
Carub.0006s3083 10.0kb upstream 10.0kb upstream 13847 true scaffold_6: 13942169-13956015 Capsella rubella
Carub.0006s3083 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13942169-13952168 Capsella rubella
Carub.0006s3083 10.0kb downstream 10.0kb downstream 13847 true scaffold_6: 13952169-13966015 Capsella rubella
Carub.0006s3083 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13956016-13966015 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366224 5261 Brassicaceae View MSA
123837595 5264 Brassicales-Malvales View MSA
124337673 5266 SBM View MSA
124240759 5268 Malvidae View MSA
124064254 5270 Rosid View MSA
123737041 5271 Pentapetalae View MSA
122785711 5272 Eudicot View MSA
122043295 5273 Angiosperm View MSA
121350840 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain