Gene : Carub.0006s3106 C. rubella v1.1
Defline:  (1 of 2) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  3106
Name:  ? Carub.0006s3106 Secondary Identifier:  ? PAC:39249491
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3106 0.5kb upstream 0.5kb upstream 3321 true scaffold_6: 14071174-14074494 Capsella rubella
Carub.0006s3106 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14073995-14074494 Capsella rubella
Carub.0006s3106 0.5kb downstream 0.5kb downstream 3321 true scaffold_6: 14070674-14073994 Capsella rubella
Carub.0006s3106 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14070674-14071173 Capsella rubella
Carub.0006s3106 1.0kb upstream 1.0kb upstream 3821 true scaffold_6: 14071174-14074994 Capsella rubella
Carub.0006s3106 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14073995-14074994 Capsella rubella
Carub.0006s3106 1.0kb downstream 1.0kb downstream 3821 true scaffold_6: 14070174-14073994 Capsella rubella
Carub.0006s3106 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14070174-14071173 Capsella rubella
Carub.0006s3106 2.0kb upstream 2.0kb upstream 4821 true scaffold_6: 14071174-14075994 Capsella rubella
Carub.0006s3106 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14073995-14075994 Capsella rubella
Carub.0006s3106 2.0kb downstream 2.0kb downstream 4821 true scaffold_6: 14069174-14073994 Capsella rubella
Carub.0006s3106 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14069174-14071173 Capsella rubella
Carub.0006s3106 5.0kb upstream 5.0kb upstream 7821 true scaffold_6: 14071174-14078994 Capsella rubella
Carub.0006s3106 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14073995-14078994 Capsella rubella
Carub.0006s3106 5.0kb downstream 5.0kb downstream 7821 true scaffold_6: 14066174-14073994 Capsella rubella
Carub.0006s3106 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14066174-14071173 Capsella rubella
Carub.0006s3106 10.0kb upstream 10.0kb upstream 12821 true scaffold_6: 14071174-14083994 Capsella rubella
Carub.0006s3106 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14073995-14083994 Capsella rubella
Carub.0006s3106 10.0kb downstream 10.0kb downstream 12821 true scaffold_6: 14061174-14073994 Capsella rubella
Carub.0006s3106 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14061174-14071173 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378262 5261 Brassicaceae View MSA
123838871 5264 Brassicales-Malvales View MSA
124346117 5266 SBM View MSA
124240957 5268 Malvidae View MSA
124060834 5270 Rosid View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain