Gene : Carub.0006s2554 C. rubella v1.1
Defline:  (1 of 3) 2.5.1.47//4.4.1.9 - Cysteine synthase / OAS sulfhydrylase // L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  2554
Name:  ? Carub.0006s2554 Secondary Identifier:  ? PAC:39246837
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ASPSYNII-PWY Capsella rubella pathologic  
Crubella CYSTSYN-PWY Capsella rubella pathologic  
Crubella P401-PWY Capsella rubella pathologic  
Crubella PWY-6936 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2554 0.5kb upstream 0.5kb upstream 2524 true scaffold_6: 9893656-9896179 Capsella rubella
Carub.0006s2554 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9895680-9896179 Capsella rubella
Carub.0006s2554 0.5kb downstream 0.5kb downstream 2524 true scaffold_6: 9893156-9895679 Capsella rubella
Carub.0006s2554 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9893156-9893655 Capsella rubella
Carub.0006s2554 1.0kb upstream 1.0kb upstream 3024 true scaffold_6: 9893656-9896679 Capsella rubella
Carub.0006s2554 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9895680-9896679 Capsella rubella
Carub.0006s2554 1.0kb downstream 1.0kb downstream 3024 true scaffold_6: 9892656-9895679 Capsella rubella
Carub.0006s2554 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9892656-9893655 Capsella rubella
Carub.0006s2554 2.0kb upstream 2.0kb upstream 4024 true scaffold_6: 9893656-9897679 Capsella rubella
Carub.0006s2554 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9895680-9897679 Capsella rubella
Carub.0006s2554 2.0kb downstream 2.0kb downstream 4024 true scaffold_6: 9891656-9895679 Capsella rubella
Carub.0006s2554 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9891656-9893655 Capsella rubella
Carub.0006s2554 5.0kb upstream 5.0kb upstream 7024 true scaffold_6: 9893656-9900679 Capsella rubella
Carub.0006s2554 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9895680-9900679 Capsella rubella
Carub.0006s2554 5.0kb downstream 5.0kb downstream 7024 true scaffold_6: 9888656-9895679 Capsella rubella
Carub.0006s2554 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9888656-9893655 Capsella rubella
Carub.0006s2554 10.0kb upstream 10.0kb upstream 12024 true scaffold_6: 9893656-9905679 Capsella rubella
Carub.0006s2554 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9895680-9905679 Capsella rubella
Carub.0006s2554 10.0kb downstream 10.0kb downstream 12024 true scaffold_6: 9883656-9895679 Capsella rubella
Carub.0006s2554 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9883656-9893655 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363592 5261 Brassicaceae View MSA
123798573 5264 Brassicales-Malvales View MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain