Gene : Carub.0006s1679 C. rubella v1.1
Defline:  (1 of 3) PTHR21229//PTHR21229:SF26 - LUNG SEVEN TRANSMEMBRANE RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  1679
Name:  ? Carub.0006s1679 Secondary Identifier:  ? PAC:39248129
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1679 0.5kb upstream 0.5kb upstream 2167 true scaffold_6: 6181409-6183575 Capsella rubella
Carub.0006s1679 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6181409-6181908 Capsella rubella
Carub.0006s1679 0.5kb downstream 0.5kb downstream 2167 true scaffold_6: 6181909-6184075 Capsella rubella
Carub.0006s1679 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6183576-6184075 Capsella rubella
Carub.0006s1679 1.0kb upstream 1.0kb upstream 2667 true scaffold_6: 6180909-6183575 Capsella rubella
Carub.0006s1679 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6180909-6181908 Capsella rubella
Carub.0006s1679 1.0kb downstream 1.0kb downstream 2667 true scaffold_6: 6181909-6184575 Capsella rubella
Carub.0006s1679 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6183576-6184575 Capsella rubella
Carub.0006s1679 2.0kb upstream 2.0kb upstream 3667 true scaffold_6: 6179909-6183575 Capsella rubella
Carub.0006s1679 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6179909-6181908 Capsella rubella
Carub.0006s1679 2.0kb downstream 2.0kb downstream 3667 true scaffold_6: 6181909-6185575 Capsella rubella
Carub.0006s1679 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6183576-6185575 Capsella rubella
Carub.0006s1679 5.0kb upstream 5.0kb upstream 6667 true scaffold_6: 6176909-6183575 Capsella rubella
Carub.0006s1679 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6176909-6181908 Capsella rubella
Carub.0006s1679 5.0kb downstream 5.0kb downstream 6667 true scaffold_6: 6181909-6188575 Capsella rubella
Carub.0006s1679 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6183576-6188575 Capsella rubella
Carub.0006s1679 10.0kb upstream 10.0kb upstream 11667 true scaffold_6: 6171909-6183575 Capsella rubella
Carub.0006s1679 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6171909-6181908 Capsella rubella
Carub.0006s1679 10.0kb downstream 10.0kb downstream 11667 true scaffold_6: 6181909-6193575 Capsella rubella
Carub.0006s1679 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6183576-6193575 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367348 5261 Brassicaceae View MSA
123835802 5264 Brassicales-Malvales View MSA
124344595 5266 SBM View MSA
124250065 5268 Malvidae View MSA
124065917 5270 Rosid View MSA
123744847 5271 Pentapetalae View MSA
122795059 5272 Eudicot View MSA
122048893 5273 Angiosperm View MSA
121346651 5274 Embryophyte View MSA
123428278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain