Gene : Carub.0006s2639 C. rubella v1.1

Defline:  (1 of 1) K10134 - etoposide-induced 2.4 mRNA (EI24) Genomic Order:  2639
Name:  ? Carub.0006s2639 Secondary Identifier:  ? PAC:39247735

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2639 0.5kb upstream 0.5kb upstream 3757 true scaffold_6: 11194238-11197994 Capsella rubella
Carub.0006s2639 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 11194238-11194737 Capsella rubella
Carub.0006s2639 0.5kb downstream 0.5kb downstream 3757 true scaffold_6: 11194738-11198494 Capsella rubella
Carub.0006s2639 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 11197995-11198494 Capsella rubella
Carub.0006s2639 1.0kb upstream 1.0kb upstream 4257 true scaffold_6: 11193738-11197994 Capsella rubella
Carub.0006s2639 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 11193738-11194737 Capsella rubella
Carub.0006s2639 1.0kb downstream 1.0kb downstream 4257 true scaffold_6: 11194738-11198994 Capsella rubella
Carub.0006s2639 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 11197995-11198994 Capsella rubella
Carub.0006s2639 2.0kb upstream 2.0kb upstream 5257 true scaffold_6: 11192738-11197994 Capsella rubella
Carub.0006s2639 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 11192738-11194737 Capsella rubella
Carub.0006s2639 2.0kb downstream 2.0kb downstream 5257 true scaffold_6: 11194738-11199994 Capsella rubella
Carub.0006s2639 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 11197995-11199994 Capsella rubella
Carub.0006s2639 5.0kb upstream 5.0kb upstream 8257 true scaffold_6: 11189738-11197994 Capsella rubella
Carub.0006s2639 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 11189738-11194737 Capsella rubella
Carub.0006s2639 5.0kb downstream 5.0kb downstream 8257 true scaffold_6: 11194738-11202994 Capsella rubella
Carub.0006s2639 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 11197995-11202994 Capsella rubella
Carub.0006s2639 10.0kb upstream 10.0kb upstream 13257 true scaffold_6: 11184738-11197994 Capsella rubella
Carub.0006s2639 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 11184738-11194737 Capsella rubella
Carub.0006s2639 10.0kb downstream 10.0kb downstream 13257 true scaffold_6: 11194738-11207994 Capsella rubella
Carub.0006s2639 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 11197995-11207994 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370368 5261 Brassicaceae View MSA
123829704 5264 Brassicales-Malvales View MSA
124337393 5266 SBM View MSA
124238213 5268 Malvidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain