Gene : Carub.0006s1685 C. rubella v1.1

Defline:  (1 of 1) PTHR11702//PTHR11702:SF20 - DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED // GTP-BINDING PROTEIN OBGC, CHLOROPLASTIC Genomic Order:  1685
Name:  ? Carub.0006s1685 Secondary Identifier:  ? PAC:39249206

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1685 0.5kb upstream 0.5kb upstream 3597 true scaffold_6: 6211814-6215410 Capsella rubella
Carub.0006s1685 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6214911-6215410 Capsella rubella
Carub.0006s1685 0.5kb downstream 0.5kb downstream 3597 true scaffold_6: 6211314-6214910 Capsella rubella
Carub.0006s1685 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6211314-6211813 Capsella rubella
Carub.0006s1685 1.0kb upstream 1.0kb upstream 4097 true scaffold_6: 6211814-6215910 Capsella rubella
Carub.0006s1685 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6214911-6215910 Capsella rubella
Carub.0006s1685 1.0kb downstream 1.0kb downstream 4097 true scaffold_6: 6210814-6214910 Capsella rubella
Carub.0006s1685 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6210814-6211813 Capsella rubella
Carub.0006s1685 2.0kb upstream 2.0kb upstream 5097 true scaffold_6: 6211814-6216910 Capsella rubella
Carub.0006s1685 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6214911-6216910 Capsella rubella
Carub.0006s1685 2.0kb downstream 2.0kb downstream 5097 true scaffold_6: 6209814-6214910 Capsella rubella
Carub.0006s1685 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6209814-6211813 Capsella rubella
Carub.0006s1685 5.0kb upstream 5.0kb upstream 8097 true scaffold_6: 6211814-6219910 Capsella rubella
Carub.0006s1685 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6214911-6219910 Capsella rubella
Carub.0006s1685 5.0kb downstream 5.0kb downstream 8097 true scaffold_6: 6206814-6214910 Capsella rubella
Carub.0006s1685 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6206814-6211813 Capsella rubella
Carub.0006s1685 10.0kb upstream 10.0kb upstream 13097 true scaffold_6: 6211814-6224910 Capsella rubella
Carub.0006s1685 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6214911-6224910 Capsella rubella
Carub.0006s1685 10.0kb downstream 10.0kb downstream 13097 true scaffold_6: 6201814-6214910 Capsella rubella
Carub.0006s1685 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6201814-6211813 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041071 5273 Angiosperm View MSA
122367839 5261 Brassicaceae View MSA
123833813 5264 Brassicales-Malvales View MSA
124336815 5266 SBM View MSA
124241783 5268 Malvidae View MSA
124062499 5270 Rosid View MSA
123739665 5271 Pentapetalae View MSA
122793688 5272 Eudicot View MSA
121346272 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain