Gene : Carub.0006s3029 C. rubella v1.1
Defline:  (1 of 2) K12392 - AP-1 complex subunit beta-1 (AP1B1) Genomic Order:  3029
Name:  ? Carub.0006s3029 Secondary Identifier:  ? PAC:39249929
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3029 0.5kb upstream 0.5kb upstream 5879 true scaffold_6: 13745866-13751744 Capsella rubella
Carub.0006s3029 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13745866-13746365 Capsella rubella
Carub.0006s3029 0.5kb downstream 0.5kb downstream 5879 true scaffold_6: 13746366-13752244 Capsella rubella
Carub.0006s3029 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13751745-13752244 Capsella rubella
Carub.0006s3029 1.0kb upstream 1.0kb upstream 6379 true scaffold_6: 13745366-13751744 Capsella rubella
Carub.0006s3029 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13745366-13746365 Capsella rubella
Carub.0006s3029 1.0kb downstream 1.0kb downstream 6379 true scaffold_6: 13746366-13752744 Capsella rubella
Carub.0006s3029 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13751745-13752744 Capsella rubella
Carub.0006s3029 2.0kb upstream 2.0kb upstream 7379 true scaffold_6: 13744366-13751744 Capsella rubella
Carub.0006s3029 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13744366-13746365 Capsella rubella
Carub.0006s3029 2.0kb downstream 2.0kb downstream 7379 true scaffold_6: 13746366-13753744 Capsella rubella
Carub.0006s3029 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13751745-13753744 Capsella rubella
Carub.0006s3029 5.0kb upstream 5.0kb upstream 10379 true scaffold_6: 13741366-13751744 Capsella rubella
Carub.0006s3029 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13741366-13746365 Capsella rubella
Carub.0006s3029 5.0kb downstream 5.0kb downstream 10379 true scaffold_6: 13746366-13756744 Capsella rubella
Carub.0006s3029 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13751745-13756744 Capsella rubella
Carub.0006s3029 10.0kb upstream 10.0kb upstream 15379 true scaffold_6: 13736366-13751744 Capsella rubella
Carub.0006s3029 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13736366-13746365 Capsella rubella
Carub.0006s3029 10.0kb downstream 10.0kb downstream 15379 true scaffold_6: 13746366-13761744 Capsella rubella
Carub.0006s3029 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13751745-13761744 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368721 5261 Brassicaceae View MSA
123836878 5264 Brassicales-Malvales View MSA
124343500 5266 SBM View MSA
124254601 5268 Malvidae View MSA
124062772 5270 Rosid View MSA
123744505 5271 Pentapetalae View MSA
122790375 5272 Eudicot View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain