Gene : Carub.0006s2470 C. rubella v1.1

Genomic Order:  2470 Name:  ? Carub.0006s2470
Secondary Identifier:  ? PAC:39246597

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2470 0.5kb upstream 0.5kb upstream 1641 true scaffold_6: 9464858-9466498 Capsella rubella
Carub.0006s2470 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9465999-9466498 Capsella rubella
Carub.0006s2470 0.5kb downstream 0.5kb downstream 1641 true scaffold_6: 9464358-9465998 Capsella rubella
Carub.0006s2470 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9464358-9464857 Capsella rubella
Carub.0006s2470 1.0kb upstream 1.0kb upstream 2141 true scaffold_6: 9464858-9466998 Capsella rubella
Carub.0006s2470 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9465999-9466998 Capsella rubella
Carub.0006s2470 1.0kb downstream 1.0kb downstream 2141 true scaffold_6: 9463858-9465998 Capsella rubella
Carub.0006s2470 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9463858-9464857 Capsella rubella
Carub.0006s2470 2.0kb upstream 2.0kb upstream 3141 true scaffold_6: 9464858-9467998 Capsella rubella
Carub.0006s2470 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9465999-9467998 Capsella rubella
Carub.0006s2470 2.0kb downstream 2.0kb downstream 3141 true scaffold_6: 9462858-9465998 Capsella rubella
Carub.0006s2470 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9462858-9464857 Capsella rubella
Carub.0006s2470 5.0kb upstream 5.0kb upstream 6141 true scaffold_6: 9464858-9470998 Capsella rubella
Carub.0006s2470 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9465999-9470998 Capsella rubella
Carub.0006s2470 5.0kb downstream 5.0kb downstream 6141 true scaffold_6: 9459858-9465998 Capsella rubella
Carub.0006s2470 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9459858-9464857 Capsella rubella
Carub.0006s2470 10.0kb upstream 10.0kb upstream 11141 true scaffold_6: 9464858-9475998 Capsella rubella
Carub.0006s2470 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9465999-9475998 Capsella rubella
Carub.0006s2470 10.0kb downstream 10.0kb downstream 11141 true scaffold_6: 9454858-9465998 Capsella rubella
Carub.0006s2470 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9454858-9464857 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365872 5261 Brassicaceae View MSA
123799055 5264 Brassicales-Malvales View MSA
124296614 5266 SBM View MSA
124148715 5268 Malvidae View MSA
124071436 5270 Rosid View MSA
123750865 5271 Pentapetalae View MSA
122773852 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain