Gene : Carub.0006s2482 C. rubella v1.1

Defline:  (1 of 1) PTHR11669//PTHR11669:SF1 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  2482
Name:  ? Carub.0006s2482 Secondary Identifier:  ? PAC:39246305

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2482 0.5kb upstream 0.5kb upstream 3854 true scaffold_6: 9523380-9527233 Capsella rubella
Carub.0006s2482 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9526734-9527233 Capsella rubella
Carub.0006s2482 0.5kb downstream 0.5kb downstream 3854 true scaffold_6: 9522880-9526733 Capsella rubella
Carub.0006s2482 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9522880-9523379 Capsella rubella
Carub.0006s2482 1.0kb upstream 1.0kb upstream 4354 true scaffold_6: 9523380-9527733 Capsella rubella
Carub.0006s2482 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9526734-9527733 Capsella rubella
Carub.0006s2482 1.0kb downstream 1.0kb downstream 4354 true scaffold_6: 9522380-9526733 Capsella rubella
Carub.0006s2482 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9522380-9523379 Capsella rubella
Carub.0006s2482 2.0kb upstream 2.0kb upstream 5354 true scaffold_6: 9523380-9528733 Capsella rubella
Carub.0006s2482 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9526734-9528733 Capsella rubella
Carub.0006s2482 2.0kb downstream 2.0kb downstream 5354 true scaffold_6: 9521380-9526733 Capsella rubella
Carub.0006s2482 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9521380-9523379 Capsella rubella
Carub.0006s2482 5.0kb upstream 5.0kb upstream 8354 true scaffold_6: 9523380-9531733 Capsella rubella
Carub.0006s2482 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9526734-9531733 Capsella rubella
Carub.0006s2482 5.0kb downstream 5.0kb downstream 8354 true scaffold_6: 9518380-9526733 Capsella rubella
Carub.0006s2482 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9518380-9523379 Capsella rubella
Carub.0006s2482 10.0kb upstream 10.0kb upstream 13354 true scaffold_6: 9523380-9536733 Capsella rubella
Carub.0006s2482 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9526734-9536733 Capsella rubella
Carub.0006s2482 10.0kb downstream 10.0kb downstream 13354 true scaffold_6: 9513380-9526733 Capsella rubella
Carub.0006s2482 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9513380-9523379 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363772 5261 Brassicaceae View MSA
123827915 5264 Brassicales-Malvales View MSA
124341538 5266 SBM View MSA
124242698 5268 Malvidae View MSA
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain