Gene : Carub.0006s2508 C. rubella v1.1
Defline:  (1 of 1) 2.7.1.36 - Mevalonate kinase Genomic Order:  2508
Name:  ? Carub.0006s2508 Secondary Identifier:  ? PAC:39249943
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5910 Capsella rubella pathologic  
Crubella PWY-922 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2508 0.5kb upstream 0.5kb upstream 2990 true scaffold_6: 9642283-9645272 Capsella rubella
Carub.0006s2508 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9644773-9645272 Capsella rubella
Carub.0006s2508 0.5kb downstream 0.5kb downstream 2990 true scaffold_6: 9641783-9644772 Capsella rubella
Carub.0006s2508 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9641783-9642282 Capsella rubella
Carub.0006s2508 1.0kb upstream 1.0kb upstream 3490 true scaffold_6: 9642283-9645772 Capsella rubella
Carub.0006s2508 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9644773-9645772 Capsella rubella
Carub.0006s2508 1.0kb downstream 1.0kb downstream 3490 true scaffold_6: 9641283-9644772 Capsella rubella
Carub.0006s2508 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9641283-9642282 Capsella rubella
Carub.0006s2508 2.0kb upstream 2.0kb upstream 4490 true scaffold_6: 9642283-9646772 Capsella rubella
Carub.0006s2508 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9644773-9646772 Capsella rubella
Carub.0006s2508 2.0kb downstream 2.0kb downstream 4490 true scaffold_6: 9640283-9644772 Capsella rubella
Carub.0006s2508 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9640283-9642282 Capsella rubella
Carub.0006s2508 5.0kb upstream 5.0kb upstream 7490 true scaffold_6: 9642283-9649772 Capsella rubella
Carub.0006s2508 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9644773-9649772 Capsella rubella
Carub.0006s2508 5.0kb downstream 5.0kb downstream 7490 true scaffold_6: 9637283-9644772 Capsella rubella
Carub.0006s2508 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9637283-9642282 Capsella rubella
Carub.0006s2508 10.0kb upstream 10.0kb upstream 12490 true scaffold_6: 9642283-9654772 Capsella rubella
Carub.0006s2508 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9644773-9654772 Capsella rubella
Carub.0006s2508 10.0kb downstream 10.0kb downstream 12490 true scaffold_6: 9632283-9644772 Capsella rubella
Carub.0006s2508 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9632283-9642282 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
122366195 5261 Brassicaceae View MSA
123840116 5264 Brassicales-Malvales View MSA
124346036 5266 SBM View MSA
124238701 5268 Malvidae View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain