Gene : Carub.0006s2507 C. rubella v1.1
Defline:  (1 of 11) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2507
Name:  ? Carub.0006s2507 Secondary Identifier:  ? PAC:39248582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2507 0.5kb upstream 0.5kb upstream 2527 true scaffold_6: 9639918-9642444 Capsella rubella
Carub.0006s2507 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9639918-9640417 Capsella rubella
Carub.0006s2507 0.5kb downstream 0.5kb downstream 2527 true scaffold_6: 9640418-9642944 Capsella rubella
Carub.0006s2507 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9642445-9642944 Capsella rubella
Carub.0006s2507 1.0kb upstream 1.0kb upstream 3027 true scaffold_6: 9639418-9642444 Capsella rubella
Carub.0006s2507 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9639418-9640417 Capsella rubella
Carub.0006s2507 1.0kb downstream 1.0kb downstream 3027 true scaffold_6: 9640418-9643444 Capsella rubella
Carub.0006s2507 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9642445-9643444 Capsella rubella
Carub.0006s2507 2.0kb upstream 2.0kb upstream 4027 true scaffold_6: 9638418-9642444 Capsella rubella
Carub.0006s2507 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9638418-9640417 Capsella rubella
Carub.0006s2507 2.0kb downstream 2.0kb downstream 4027 true scaffold_6: 9640418-9644444 Capsella rubella
Carub.0006s2507 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9642445-9644444 Capsella rubella
Carub.0006s2507 5.0kb upstream 5.0kb upstream 7027 true scaffold_6: 9635418-9642444 Capsella rubella
Carub.0006s2507 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9635418-9640417 Capsella rubella
Carub.0006s2507 5.0kb downstream 5.0kb downstream 7027 true scaffold_6: 9640418-9647444 Capsella rubella
Carub.0006s2507 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9642445-9647444 Capsella rubella
Carub.0006s2507 10.0kb upstream 10.0kb upstream 12027 true scaffold_6: 9630418-9642444 Capsella rubella
Carub.0006s2507 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9630418-9640417 Capsella rubella
Carub.0006s2507 10.0kb downstream 10.0kb downstream 12027 true scaffold_6: 9640418-9652444 Capsella rubella
Carub.0006s2507 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9642445-9652444 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376440 5261 Brassicaceae View MSA
123829670 5264 Brassicales-Malvales View MSA
124343185 5266 SBM View MSA
124239016 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain