Gene : Carub.0006s2510 C. rubella v1.1

Defline:  (1 of 2) K12948 - signal peptidase complex subunit 3 (SPCS3, SPC3) Genomic Order:  2510
Name:  ? Carub.0006s2510 Secondary Identifier:  ? PAC:39249275

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2510 0.5kb upstream 0.5kb upstream 2356 true scaffold_6: 9646150-9648505 Capsella rubella
Carub.0006s2510 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9648006-9648505 Capsella rubella
Carub.0006s2510 0.5kb downstream 0.5kb downstream 2356 true scaffold_6: 9645650-9648005 Capsella rubella
Carub.0006s2510 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9645650-9646149 Capsella rubella
Carub.0006s2510 1.0kb upstream 1.0kb upstream 2856 true scaffold_6: 9646150-9649005 Capsella rubella
Carub.0006s2510 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9648006-9649005 Capsella rubella
Carub.0006s2510 1.0kb downstream 1.0kb downstream 2856 true scaffold_6: 9645150-9648005 Capsella rubella
Carub.0006s2510 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9645150-9646149 Capsella rubella
Carub.0006s2510 2.0kb upstream 2.0kb upstream 3856 true scaffold_6: 9646150-9650005 Capsella rubella
Carub.0006s2510 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9648006-9650005 Capsella rubella
Carub.0006s2510 2.0kb downstream 2.0kb downstream 3856 true scaffold_6: 9644150-9648005 Capsella rubella
Carub.0006s2510 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9644150-9646149 Capsella rubella
Carub.0006s2510 5.0kb upstream 5.0kb upstream 6856 true scaffold_6: 9646150-9653005 Capsella rubella
Carub.0006s2510 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9648006-9653005 Capsella rubella
Carub.0006s2510 5.0kb downstream 5.0kb downstream 6856 true scaffold_6: 9641150-9648005 Capsella rubella
Carub.0006s2510 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9641150-9646149 Capsella rubella
Carub.0006s2510 10.0kb upstream 10.0kb upstream 11856 true scaffold_6: 9646150-9658005 Capsella rubella
Carub.0006s2510 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9648006-9658005 Capsella rubella
Carub.0006s2510 10.0kb downstream 10.0kb downstream 11856 true scaffold_6: 9636150-9648005 Capsella rubella
Carub.0006s2510 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9636150-9646149 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377083 5261 Brassicaceae View MSA
123839955 5264 Brassicales-Malvales View MSA
124347240 5266 SBM View MSA
124241687 5268 Malvidae View MSA
124062691 5270 Rosid View MSA
123748290 5271 Pentapetalae View MSA
122794035 5272 Eudicot View MSA
122042946 5273 Angiosperm View MSA
121344173 5274 Embryophyte View MSA
123424952 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain