Gene : Carub.0006s2231 C. rubella v1.1
Defline:  (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED Genomic Order:  2231
Name:  ? Carub.0006s2231 Secondary Identifier:  ? PAC:39250003
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2231 0.5kb upstream 0.5kb upstream 2425 true scaffold_6: 8396971-8399395 Capsella rubella
Carub.0006s2231 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8396971-8397470 Capsella rubella
Carub.0006s2231 0.5kb downstream 0.5kb downstream 2425 true scaffold_6: 8397471-8399895 Capsella rubella
Carub.0006s2231 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8399396-8399895 Capsella rubella
Carub.0006s2231 1.0kb upstream 1.0kb upstream 2925 true scaffold_6: 8396471-8399395 Capsella rubella
Carub.0006s2231 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8396471-8397470 Capsella rubella
Carub.0006s2231 1.0kb downstream 1.0kb downstream 2925 true scaffold_6: 8397471-8400395 Capsella rubella
Carub.0006s2231 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8399396-8400395 Capsella rubella
Carub.0006s2231 2.0kb upstream 2.0kb upstream 3925 true scaffold_6: 8395471-8399395 Capsella rubella
Carub.0006s2231 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8395471-8397470 Capsella rubella
Carub.0006s2231 2.0kb downstream 2.0kb downstream 3925 true scaffold_6: 8397471-8401395 Capsella rubella
Carub.0006s2231 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8399396-8401395 Capsella rubella
Carub.0006s2231 5.0kb upstream 5.0kb upstream 6925 true scaffold_6: 8392471-8399395 Capsella rubella
Carub.0006s2231 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8392471-8397470 Capsella rubella
Carub.0006s2231 5.0kb downstream 5.0kb downstream 6925 true scaffold_6: 8397471-8404395 Capsella rubella
Carub.0006s2231 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8399396-8404395 Capsella rubella
Carub.0006s2231 10.0kb upstream 10.0kb upstream 11925 true scaffold_6: 8387471-8399395 Capsella rubella
Carub.0006s2231 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8387471-8397470 Capsella rubella
Carub.0006s2231 10.0kb downstream 10.0kb downstream 11925 true scaffold_6: 8397471-8409395 Capsella rubella
Carub.0006s2231 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8399396-8409395 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364518 5261 Brassicaceae View MSA
123832507 5264 Brassicales-Malvales View MSA
124341157 5266 SBM View MSA
124238845 5268 Malvidae View MSA
124068833 5270 Rosid View MSA
123738015 5271 Pentapetalae View MSA
122786116 5272 Eudicot View MSA
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain