Gene : Carub.0006s2380 C. rubella v1.1

Defline:  (1 of 1) K11418 - histone deacetylase 11 (HDAC11) Genomic Order:  2380
Name:  ? Carub.0006s2380 Secondary Identifier:  ? PAC:39248146

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2380 0.5kb upstream 0.5kb upstream 3960 true scaffold_6: 9064490-9068449 Capsella rubella
Carub.0006s2380 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9067950-9068449 Capsella rubella
Carub.0006s2380 0.5kb downstream 0.5kb downstream 3960 true scaffold_6: 9063990-9067949 Capsella rubella
Carub.0006s2380 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9063990-9064489 Capsella rubella
Carub.0006s2380 1.0kb upstream 1.0kb upstream 4460 true scaffold_6: 9064490-9068949 Capsella rubella
Carub.0006s2380 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9067950-9068949 Capsella rubella
Carub.0006s2380 1.0kb downstream 1.0kb downstream 4460 true scaffold_6: 9063490-9067949 Capsella rubella
Carub.0006s2380 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9063490-9064489 Capsella rubella
Carub.0006s2380 2.0kb upstream 2.0kb upstream 5460 true scaffold_6: 9064490-9069949 Capsella rubella
Carub.0006s2380 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9067950-9069949 Capsella rubella
Carub.0006s2380 2.0kb downstream 2.0kb downstream 5460 true scaffold_6: 9062490-9067949 Capsella rubella
Carub.0006s2380 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9062490-9064489 Capsella rubella
Carub.0006s2380 5.0kb upstream 5.0kb upstream 8460 true scaffold_6: 9064490-9072949 Capsella rubella
Carub.0006s2380 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9067950-9072949 Capsella rubella
Carub.0006s2380 5.0kb downstream 5.0kb downstream 8460 true scaffold_6: 9059490-9067949 Capsella rubella
Carub.0006s2380 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9059490-9064489 Capsella rubella
Carub.0006s2380 10.0kb upstream 10.0kb upstream 13460 true scaffold_6: 9064490-9077949 Capsella rubella
Carub.0006s2380 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9067950-9077949 Capsella rubella
Carub.0006s2380 10.0kb downstream 10.0kb downstream 13460 true scaffold_6: 9054490-9067949 Capsella rubella
Carub.0006s2380 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9054490-9064489 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370164 5261 Brassicaceae View MSA
123831263 5264 Brassicales-Malvales View MSA
124336879 5266 SBM View MSA
124242055 5268 Malvidae View MSA
124064548 5270 Rosid View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain