Gene : Carub.0007s0942 C. rubella v1.1

Defline:  (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  942
Name:  ? Carub.0007s0942 Secondary Identifier:  ? PAC:39235552

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0942 0.5kb upstream 0.5kb upstream 2706 true scaffold_7: 3589905-3592610 Capsella rubella
Carub.0007s0942 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3592111-3592610 Capsella rubella
Carub.0007s0942 0.5kb downstream 0.5kb downstream 2706 true scaffold_7: 3589405-3592110 Capsella rubella
Carub.0007s0942 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3589405-3589904 Capsella rubella
Carub.0007s0942 1.0kb upstream 1.0kb upstream 3206 true scaffold_7: 3589905-3593110 Capsella rubella
Carub.0007s0942 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3592111-3593110 Capsella rubella
Carub.0007s0942 1.0kb downstream 1.0kb downstream 3206 true scaffold_7: 3588905-3592110 Capsella rubella
Carub.0007s0942 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3588905-3589904 Capsella rubella
Carub.0007s0942 2.0kb upstream 2.0kb upstream 4206 true scaffold_7: 3589905-3594110 Capsella rubella
Carub.0007s0942 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3592111-3594110 Capsella rubella
Carub.0007s0942 2.0kb downstream 2.0kb downstream 4206 true scaffold_7: 3587905-3592110 Capsella rubella
Carub.0007s0942 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3587905-3589904 Capsella rubella
Carub.0007s0942 5.0kb upstream 5.0kb upstream 7206 true scaffold_7: 3589905-3597110 Capsella rubella
Carub.0007s0942 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3592111-3597110 Capsella rubella
Carub.0007s0942 5.0kb downstream 5.0kb downstream 7206 true scaffold_7: 3584905-3592110 Capsella rubella
Carub.0007s0942 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3584905-3589904 Capsella rubella
Carub.0007s0942 10.0kb upstream 10.0kb upstream 12206 true scaffold_7: 3589905-3602110 Capsella rubella
Carub.0007s0942 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3592111-3602110 Capsella rubella
Carub.0007s0942 10.0kb downstream 10.0kb downstream 12206 true scaffold_7: 3579905-3592110 Capsella rubella
Carub.0007s0942 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3579905-3589904 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361426 5261 Brassicaceae View MSA
123833895 5264 Brassicales-Malvales View MSA
124344679 5266 SBM View MSA
124240379 5268 Malvidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain