Gene : Carub.0007s0674 C. rubella v1.1
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  674
Name:  ? Carub.0007s0674 Secondary Identifier:  ? PAC:39234088
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5097 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0674 0.5kb upstream 0.5kb upstream 3709 true scaffold_7: 2503053-2506761 Capsella rubella
Carub.0007s0674 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2503053-2503552 Capsella rubella
Carub.0007s0674 0.5kb downstream 0.5kb downstream 3709 true scaffold_7: 2503553-2507261 Capsella rubella
Carub.0007s0674 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2506762-2507261 Capsella rubella
Carub.0007s0674 1.0kb upstream 1.0kb upstream 4209 true scaffold_7: 2502553-2506761 Capsella rubella
Carub.0007s0674 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2502553-2503552 Capsella rubella
Carub.0007s0674 1.0kb downstream 1.0kb downstream 4209 true scaffold_7: 2503553-2507761 Capsella rubella
Carub.0007s0674 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2506762-2507761 Capsella rubella
Carub.0007s0674 2.0kb upstream 2.0kb upstream 5209 true scaffold_7: 2501553-2506761 Capsella rubella
Carub.0007s0674 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2501553-2503552 Capsella rubella
Carub.0007s0674 2.0kb downstream 2.0kb downstream 5209 true scaffold_7: 2503553-2508761 Capsella rubella
Carub.0007s0674 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2506762-2508761 Capsella rubella
Carub.0007s0674 5.0kb upstream 5.0kb upstream 8209 true scaffold_7: 2498553-2506761 Capsella rubella
Carub.0007s0674 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2498553-2503552 Capsella rubella
Carub.0007s0674 5.0kb downstream 5.0kb downstream 8209 true scaffold_7: 2503553-2511761 Capsella rubella
Carub.0007s0674 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2506762-2511761 Capsella rubella
Carub.0007s0674 10.0kb upstream 10.0kb upstream 13209 true scaffold_7: 2493553-2506761 Capsella rubella
Carub.0007s0674 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2493553-2503552 Capsella rubella
Carub.0007s0674 10.0kb downstream 10.0kb downstream 13209 true scaffold_7: 2503553-2516761 Capsella rubella
Carub.0007s0674 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2506762-2516761 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365639 5261 Brassicaceae View MSA
123833464 5264 Brassicales-Malvales View MSA
124338935 5266 SBM View MSA
124252486 5268 Malvidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain