Gene : Carub.0007s0765 C. rubella v1.1
Defline:  (1 of 7) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Genomic Order:  765
Name:  ? Carub.0007s0765 Secondary Identifier:  ? PAC:39233391
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ANAEROFRUCAT-PWY Capsella rubella pathologic  
Crubella ANAGLYCOLYSIS-PWY Capsella rubella pathologic  
Crubella PWY-1042 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0765 0.5kb upstream 0.5kb upstream 4137 true scaffold_7: 2870511-2874647 Capsella rubella
Carub.0007s0765 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2870511-2871010 Capsella rubella
Carub.0007s0765 0.5kb downstream 0.5kb downstream 4137 true scaffold_7: 2871011-2875147 Capsella rubella
Carub.0007s0765 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2874648-2875147 Capsella rubella
Carub.0007s0765 1.0kb upstream 1.0kb upstream 4637 true scaffold_7: 2870011-2874647 Capsella rubella
Carub.0007s0765 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2870011-2871010 Capsella rubella
Carub.0007s0765 1.0kb downstream 1.0kb downstream 4637 true scaffold_7: 2871011-2875647 Capsella rubella
Carub.0007s0765 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2874648-2875647 Capsella rubella
Carub.0007s0765 2.0kb upstream 2.0kb upstream 5637 true scaffold_7: 2869011-2874647 Capsella rubella
Carub.0007s0765 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2869011-2871010 Capsella rubella
Carub.0007s0765 2.0kb downstream 2.0kb downstream 5637 true scaffold_7: 2871011-2876647 Capsella rubella
Carub.0007s0765 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2874648-2876647 Capsella rubella
Carub.0007s0765 5.0kb upstream 5.0kb upstream 8637 true scaffold_7: 2866011-2874647 Capsella rubella
Carub.0007s0765 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2866011-2871010 Capsella rubella
Carub.0007s0765 5.0kb downstream 5.0kb downstream 8637 true scaffold_7: 2871011-2879647 Capsella rubella
Carub.0007s0765 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2874648-2879647 Capsella rubella
Carub.0007s0765 10.0kb upstream 10.0kb upstream 13637 true scaffold_7: 2861011-2874647 Capsella rubella
Carub.0007s0765 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2861011-2871010 Capsella rubella
Carub.0007s0765 10.0kb downstream 10.0kb downstream 13637 true scaffold_7: 2871011-2884647 Capsella rubella
Carub.0007s0765 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2874648-2884647 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122367046 5261 Brassicaceae View MSA
123799285 5264 Brassicales-Malvales View MSA
124296821 5266 SBM View MSA
124246868 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain