Gene : Carub.0007s0522 C. rubella v1.1
Defline:  (1 of 3) 1.11.1.6 - Catalase Genomic Order:  522
Name:  ? Carub.0007s0522 Secondary Identifier:  ? PAC:39232396
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella DETOX1-PWY Capsella rubella pathologic  
Crubella DETOX1-PWY-1 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0522 0.5kb upstream 0.5kb upstream 3288 true scaffold_7: 1955659-1958946 Capsella rubella
Carub.0007s0522 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1955659-1956158 Capsella rubella
Carub.0007s0522 0.5kb downstream 0.5kb downstream 3288 true scaffold_7: 1956159-1959446 Capsella rubella
Carub.0007s0522 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1958947-1959446 Capsella rubella
Carub.0007s0522 1.0kb upstream 1.0kb upstream 3788 true scaffold_7: 1955159-1958946 Capsella rubella
Carub.0007s0522 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1955159-1956158 Capsella rubella
Carub.0007s0522 1.0kb downstream 1.0kb downstream 3788 true scaffold_7: 1956159-1959946 Capsella rubella
Carub.0007s0522 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1958947-1959946 Capsella rubella
Carub.0007s0522 2.0kb upstream 2.0kb upstream 4788 true scaffold_7: 1954159-1958946 Capsella rubella
Carub.0007s0522 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1954159-1956158 Capsella rubella
Carub.0007s0522 2.0kb downstream 2.0kb downstream 4788 true scaffold_7: 1956159-1960946 Capsella rubella
Carub.0007s0522 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1958947-1960946 Capsella rubella
Carub.0007s0522 5.0kb upstream 5.0kb upstream 7788 true scaffold_7: 1951159-1958946 Capsella rubella
Carub.0007s0522 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1951159-1956158 Capsella rubella
Carub.0007s0522 5.0kb downstream 5.0kb downstream 7788 true scaffold_7: 1956159-1963946 Capsella rubella
Carub.0007s0522 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1958947-1963946 Capsella rubella
Carub.0007s0522 10.0kb upstream 10.0kb upstream 12788 true scaffold_7: 1946159-1958946 Capsella rubella
Carub.0007s0522 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1946159-1956158 Capsella rubella
Carub.0007s0522 10.0kb downstream 10.0kb downstream 12788 true scaffold_7: 1956159-1968946 Capsella rubella
Carub.0007s0522 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1958947-1968946 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122367611 5261 Brassicaceae View MSA
123837299 5264 Brassicales-Malvales View MSA
124338278 5266 SBM View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain