Gene : Carub.0007s0531 C. rubella v1.1
Defline:  (1 of 3) PTHR31356//PTHR31356:SF9 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE 3, PEROXISOMAL Genomic Order:  531
Name:  ? Carub.0007s0531 Secondary Identifier:  ? PAC:39235401
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2261 Capsella rubella pathologic  
Crubella PWY-6959 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0531 0.5kb upstream 0.5kb upstream 3335 true scaffold_7: 1998090-2001424 Capsella rubella
Carub.0007s0531 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1998090-1998589 Capsella rubella
Carub.0007s0531 0.5kb downstream 0.5kb downstream 3335 true scaffold_7: 1998590-2001924 Capsella rubella
Carub.0007s0531 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2001425-2001924 Capsella rubella
Carub.0007s0531 1.0kb upstream 1.0kb upstream 3835 true scaffold_7: 1997590-2001424 Capsella rubella
Carub.0007s0531 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1997590-1998589 Capsella rubella
Carub.0007s0531 1.0kb downstream 1.0kb downstream 3835 true scaffold_7: 1998590-2002424 Capsella rubella
Carub.0007s0531 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2001425-2002424 Capsella rubella
Carub.0007s0531 2.0kb upstream 2.0kb upstream 4835 true scaffold_7: 1996590-2001424 Capsella rubella
Carub.0007s0531 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1996590-1998589 Capsella rubella
Carub.0007s0531 2.0kb downstream 2.0kb downstream 4835 true scaffold_7: 1998590-2003424 Capsella rubella
Carub.0007s0531 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2001425-2003424 Capsella rubella
Carub.0007s0531 5.0kb upstream 5.0kb upstream 7835 true scaffold_7: 1993590-2001424 Capsella rubella
Carub.0007s0531 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1993590-1998589 Capsella rubella
Carub.0007s0531 5.0kb downstream 5.0kb downstream 7835 true scaffold_7: 1998590-2006424 Capsella rubella
Carub.0007s0531 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2001425-2006424 Capsella rubella
Carub.0007s0531 10.0kb upstream 10.0kb upstream 12835 true scaffold_7: 1988590-2001424 Capsella rubella
Carub.0007s0531 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1988590-1998589 Capsella rubella
Carub.0007s0531 10.0kb downstream 10.0kb downstream 12835 true scaffold_7: 1998590-2011424 Capsella rubella
Carub.0007s0531 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2001425-2011424 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363389 5261 Brassicaceae View MSA
123829601 5264 Brassicales-Malvales View MSA
124337112 5266 SBM View MSA
124238515 5268 Malvidae View MSA
124073677 5270 Rosid View MSA
123749016 5271 Pentapetalae View MSA
122789875 5272 Eudicot View MSA
122047258 5273 Angiosperm View MSA
121344023 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain