Gene : Carub.0007s0545 C. rubella v1.1
Defline:  (1 of 1) PF00195//PF08541 - Chalcone and stilbene synthases, N-terminal domain (Chal_sti_synt_N) // 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal (ACP_syn_III_C) Genomic Order:  545
Name:  ? Carub.0007s0545 Secondary Identifier:  ? PAC:39235147
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0545 0.5kb upstream 0.5kb upstream 2295 true scaffold_7: 2055791-2058085 Capsella rubella
Carub.0007s0545 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2057586-2058085 Capsella rubella
Carub.0007s0545 0.5kb downstream 0.5kb downstream 2295 true scaffold_7: 2055291-2057585 Capsella rubella
Carub.0007s0545 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2055291-2055790 Capsella rubella
Carub.0007s0545 1.0kb upstream 1.0kb upstream 2795 true scaffold_7: 2055791-2058585 Capsella rubella
Carub.0007s0545 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2057586-2058585 Capsella rubella
Carub.0007s0545 1.0kb downstream 1.0kb downstream 2795 true scaffold_7: 2054791-2057585 Capsella rubella
Carub.0007s0545 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2054791-2055790 Capsella rubella
Carub.0007s0545 2.0kb upstream 2.0kb upstream 3795 true scaffold_7: 2055791-2059585 Capsella rubella
Carub.0007s0545 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2057586-2059585 Capsella rubella
Carub.0007s0545 2.0kb downstream 2.0kb downstream 3795 true scaffold_7: 2053791-2057585 Capsella rubella
Carub.0007s0545 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2053791-2055790 Capsella rubella
Carub.0007s0545 5.0kb upstream 5.0kb upstream 6795 true scaffold_7: 2055791-2062585 Capsella rubella
Carub.0007s0545 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2057586-2062585 Capsella rubella
Carub.0007s0545 5.0kb downstream 5.0kb downstream 6795 true scaffold_7: 2050791-2057585 Capsella rubella
Carub.0007s0545 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2050791-2055790 Capsella rubella
Carub.0007s0545 10.0kb upstream 10.0kb upstream 11795 true scaffold_7: 2055791-2067585 Capsella rubella
Carub.0007s0545 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2057586-2067585 Capsella rubella
Carub.0007s0545 10.0kb downstream 10.0kb downstream 11795 true scaffold_7: 2045791-2057585 Capsella rubella
Carub.0007s0545 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2045791-2055790 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367614 5261 Brassicaceae View MSA
123828029 5264 Brassicales-Malvales View MSA
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain