Gene : Carub.0007s0558 C. rubella v1.1
Defline:  (1 of 1) 1.13.12.1//4.1.1.19 - Arginine 2-monooxygenase / Arginine oxygenase (decarboxylating) // Arginine decarboxylase / L-arginine carboxy-lyase Genomic Order:  558
Name:  ? Carub.0007s0558 Secondary Identifier:  ? PAC:39234931
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGDEG-V-PWY Capsella rubella pathologic  
Crubella PWY-43 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0558 0.5kb upstream 0.5kb upstream 2654 true scaffold_7: 2102590-2105243 Capsella rubella
Carub.0007s0558 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2102590-2103089 Capsella rubella
Carub.0007s0558 0.5kb downstream 0.5kb downstream 2654 true scaffold_7: 2103090-2105743 Capsella rubella
Carub.0007s0558 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2105244-2105743 Capsella rubella
Carub.0007s0558 1.0kb upstream 1.0kb upstream 3154 true scaffold_7: 2102090-2105243 Capsella rubella
Carub.0007s0558 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2102090-2103089 Capsella rubella
Carub.0007s0558 1.0kb downstream 1.0kb downstream 3154 true scaffold_7: 2103090-2106243 Capsella rubella
Carub.0007s0558 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2105244-2106243 Capsella rubella
Carub.0007s0558 2.0kb upstream 2.0kb upstream 4154 true scaffold_7: 2101090-2105243 Capsella rubella
Carub.0007s0558 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2101090-2103089 Capsella rubella
Carub.0007s0558 2.0kb downstream 2.0kb downstream 4154 true scaffold_7: 2103090-2107243 Capsella rubella
Carub.0007s0558 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2105244-2107243 Capsella rubella
Carub.0007s0558 5.0kb upstream 5.0kb upstream 7154 true scaffold_7: 2098090-2105243 Capsella rubella
Carub.0007s0558 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2098090-2103089 Capsella rubella
Carub.0007s0558 5.0kb downstream 5.0kb downstream 7154 true scaffold_7: 2103090-2110243 Capsella rubella
Carub.0007s0558 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2105244-2110243 Capsella rubella
Carub.0007s0558 10.0kb upstream 10.0kb upstream 12154 true scaffold_7: 2093090-2105243 Capsella rubella
Carub.0007s0558 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2093090-2103089 Capsella rubella
Carub.0007s0558 10.0kb downstream 10.0kb downstream 12154 true scaffold_7: 2103090-2115243 Capsella rubella
Carub.0007s0558 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2105244-2115243 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369199 5261 Brassicaceae View MSA
123827460 5264 Brassicales-Malvales View MSA
124337522 5266 SBM View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain