Gene : Carub.0007s0572 C. rubella v1.1
Defline:  (1 of 3) 1.5.1.3//2.1.1.45 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase // Thymidylate synthase Genomic Order:  572
Name:  ? Carub.0007s0572 Secondary Identifier:  ? PAC:39233486
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3841 Capsella rubella pathologic  
Crubella PWY-6612 Capsella rubella pathologic  
Crubella PWY-6614 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7199 Capsella rubella pathologic  
Crubella PWY-7200 Capsella rubella pathologic  
Crubella PWY-7210 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0572 0.5kb upstream 0.5kb upstream 3984 true scaffold_7: 2149435-2153418 Capsella rubella
Carub.0007s0572 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2149435-2149934 Capsella rubella
Carub.0007s0572 0.5kb downstream 0.5kb downstream 3984 true scaffold_7: 2149935-2153918 Capsella rubella
Carub.0007s0572 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2153419-2153918 Capsella rubella
Carub.0007s0572 1.0kb upstream 1.0kb upstream 4484 true scaffold_7: 2148935-2153418 Capsella rubella
Carub.0007s0572 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2148935-2149934 Capsella rubella
Carub.0007s0572 1.0kb downstream 1.0kb downstream 4484 true scaffold_7: 2149935-2154418 Capsella rubella
Carub.0007s0572 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2153419-2154418 Capsella rubella
Carub.0007s0572 2.0kb upstream 2.0kb upstream 5484 true scaffold_7: 2147935-2153418 Capsella rubella
Carub.0007s0572 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2147935-2149934 Capsella rubella
Carub.0007s0572 2.0kb downstream 2.0kb downstream 5484 true scaffold_7: 2149935-2155418 Capsella rubella
Carub.0007s0572 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2153419-2155418 Capsella rubella
Carub.0007s0572 5.0kb upstream 5.0kb upstream 8484 true scaffold_7: 2144935-2153418 Capsella rubella
Carub.0007s0572 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2144935-2149934 Capsella rubella
Carub.0007s0572 5.0kb downstream 5.0kb downstream 8484 true scaffold_7: 2149935-2158418 Capsella rubella
Carub.0007s0572 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2153419-2158418 Capsella rubella
Carub.0007s0572 10.0kb upstream 10.0kb upstream 13484 true scaffold_7: 2139935-2153418 Capsella rubella
Carub.0007s0572 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2139935-2149934 Capsella rubella
Carub.0007s0572 10.0kb downstream 10.0kb downstream 13484 true scaffold_7: 2149935-2163418 Capsella rubella
Carub.0007s0572 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2153419-2163418 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370298 5261 Brassicaceae View MSA
123840013 5264 Brassicales-Malvales View MSA
124341694 5266 SBM View MSA
124241487 5268 Malvidae View MSA
124063247 5270 Rosid View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain