Gene : Carub.0007s0463 C. rubella v1.1

Defline:  (1 of 3) PTHR33070//PTHR33070:SF3 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  463
Name:  ? Carub.0007s0463 Secondary Identifier:  ? PAC:39232252

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0463 0.5kb upstream 0.5kb upstream 1355 true scaffold_7: 1743115-1744469 Capsella rubella
Carub.0007s0463 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1743970-1744469 Capsella rubella
Carub.0007s0463 0.5kb downstream 0.5kb downstream 1355 true scaffold_7: 1742615-1743969 Capsella rubella
Carub.0007s0463 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1742615-1743114 Capsella rubella
Carub.0007s0463 1.0kb upstream 1.0kb upstream 1855 true scaffold_7: 1743115-1744969 Capsella rubella
Carub.0007s0463 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1743970-1744969 Capsella rubella
Carub.0007s0463 1.0kb downstream 1.0kb downstream 1855 true scaffold_7: 1742115-1743969 Capsella rubella
Carub.0007s0463 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1742115-1743114 Capsella rubella
Carub.0007s0463 2.0kb upstream 2.0kb upstream 2855 true scaffold_7: 1743115-1745969 Capsella rubella
Carub.0007s0463 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1743970-1745969 Capsella rubella
Carub.0007s0463 2.0kb downstream 2.0kb downstream 2855 true scaffold_7: 1741115-1743969 Capsella rubella
Carub.0007s0463 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1741115-1743114 Capsella rubella
Carub.0007s0463 5.0kb upstream 5.0kb upstream 5855 true scaffold_7: 1743115-1748969 Capsella rubella
Carub.0007s0463 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1743970-1748969 Capsella rubella
Carub.0007s0463 5.0kb downstream 5.0kb downstream 5855 true scaffold_7: 1738115-1743969 Capsella rubella
Carub.0007s0463 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1738115-1743114 Capsella rubella
Carub.0007s0463 10.0kb upstream 10.0kb upstream 10855 true scaffold_7: 1743115-1753969 Capsella rubella
Carub.0007s0463 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1743970-1753969 Capsella rubella
Carub.0007s0463 10.0kb downstream 10.0kb downstream 10855 true scaffold_7: 1733115-1743969 Capsella rubella
Carub.0007s0463 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1733115-1743114 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369719 5261 Brassicaceae View MSA
123835914 5264 Brassicales-Malvales View MSA
124350956 5266 SBM View MSA
124248071 5268 Malvidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain