Gene : Carub.0007s0491 C. rubella v1.1
Defline:  (1 of 2) K12394 - AP-1 complex subunit sigma 1/2 (AP1S1_2) Genomic Order:  491
Name:  ? Carub.0007s0491 Secondary Identifier:  ? PAC:39231885
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0491 0.5kb upstream 0.5kb upstream 2384 true scaffold_7: 1832677-1835060 Capsella rubella
Carub.0007s0491 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1834561-1835060 Capsella rubella
Carub.0007s0491 0.5kb downstream 0.5kb downstream 2384 true scaffold_7: 1832177-1834560 Capsella rubella
Carub.0007s0491 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1832177-1832676 Capsella rubella
Carub.0007s0491 1.0kb upstream 1.0kb upstream 2884 true scaffold_7: 1832677-1835560 Capsella rubella
Carub.0007s0491 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1834561-1835560 Capsella rubella
Carub.0007s0491 1.0kb downstream 1.0kb downstream 2884 true scaffold_7: 1831677-1834560 Capsella rubella
Carub.0007s0491 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1831677-1832676 Capsella rubella
Carub.0007s0491 2.0kb upstream 2.0kb upstream 3884 true scaffold_7: 1832677-1836560 Capsella rubella
Carub.0007s0491 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1834561-1836560 Capsella rubella
Carub.0007s0491 2.0kb downstream 2.0kb downstream 3884 true scaffold_7: 1830677-1834560 Capsella rubella
Carub.0007s0491 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1830677-1832676 Capsella rubella
Carub.0007s0491 5.0kb upstream 5.0kb upstream 6884 true scaffold_7: 1832677-1839560 Capsella rubella
Carub.0007s0491 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1834561-1839560 Capsella rubella
Carub.0007s0491 5.0kb downstream 5.0kb downstream 6884 true scaffold_7: 1827677-1834560 Capsella rubella
Carub.0007s0491 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1827677-1832676 Capsella rubella
Carub.0007s0491 10.0kb upstream 10.0kb upstream 11884 true scaffold_7: 1832677-1844560 Capsella rubella
Carub.0007s0491 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1834561-1844560 Capsella rubella
Carub.0007s0491 10.0kb downstream 10.0kb downstream 11884 true scaffold_7: 1822677-1834560 Capsella rubella
Carub.0007s0491 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1822677-1832676 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343969 5261 Brassicaceae View MSA
123837085 5264 Brassicales-Malvales View MSA
124345365 5266 SBM View MSA
124253668 5268 Malvidae View MSA
124061587 5270 Rosid View MSA
123746218 5271 Pentapetalae View MSA
122797557 5272 Eudicot View MSA
122046601 5273 Angiosperm View MSA
121344866 5274 Embryophyte View MSA
123426690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain