Gene : Carub.0007s0687 C. rubella v1.1
Defline:  (1 of 1) PTHR11002//PTHR11002:SF12 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Genomic Order:  687
Name:  ? Carub.0007s0687 Secondary Identifier:  ? PAC:39235069
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYANCAT-PWY Capsella rubella pathologic  
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  
Crubella PWYQT-4429 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0687 0.5kb upstream 0.5kb upstream 2841 true scaffold_7: 2540160-2543000 Capsella rubella
Carub.0007s0687 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2542501-2543000 Capsella rubella
Carub.0007s0687 0.5kb downstream 0.5kb downstream 2841 true scaffold_7: 2539660-2542500 Capsella rubella
Carub.0007s0687 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2539660-2540159 Capsella rubella
Carub.0007s0687 1.0kb upstream 1.0kb upstream 3341 true scaffold_7: 2540160-2543500 Capsella rubella
Carub.0007s0687 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2542501-2543500 Capsella rubella
Carub.0007s0687 1.0kb downstream 1.0kb downstream 3341 true scaffold_7: 2539160-2542500 Capsella rubella
Carub.0007s0687 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2539160-2540159 Capsella rubella
Carub.0007s0687 2.0kb upstream 2.0kb upstream 4341 true scaffold_7: 2540160-2544500 Capsella rubella
Carub.0007s0687 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2542501-2544500 Capsella rubella
Carub.0007s0687 2.0kb downstream 2.0kb downstream 4341 true scaffold_7: 2538160-2542500 Capsella rubella
Carub.0007s0687 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2538160-2540159 Capsella rubella
Carub.0007s0687 5.0kb upstream 5.0kb upstream 7341 true scaffold_7: 2540160-2547500 Capsella rubella
Carub.0007s0687 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2542501-2547500 Capsella rubella
Carub.0007s0687 5.0kb downstream 5.0kb downstream 7341 true scaffold_7: 2535160-2542500 Capsella rubella
Carub.0007s0687 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2535160-2540159 Capsella rubella
Carub.0007s0687 10.0kb upstream 10.0kb upstream 12341 true scaffold_7: 2540160-2552500 Capsella rubella
Carub.0007s0687 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2542501-2552500 Capsella rubella
Carub.0007s0687 10.0kb downstream 10.0kb downstream 12341 true scaffold_7: 2530160-2542500 Capsella rubella
Carub.0007s0687 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2530160-2540159 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374795 5261 Brassicaceae View MSA
123839553 5264 Brassicales-Malvales View MSA
124340890 5266 SBM View MSA
124250883 5268 Malvidae View MSA
124068244 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain