Gene : Carub.0007s0718 C. rubella v1.1
Defline:  (1 of 1) PTHR31391//PTHR31391:SF17 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING PROTEIN REM16 Genomic Order:  718
Name:  ? Carub.0007s0718 Secondary Identifier:  ? PAC:39232481
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0718 0.5kb upstream 0.5kb upstream 2707 true scaffold_7: 2640629-2643335 Capsella rubella
Carub.0007s0718 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2640629-2641128 Capsella rubella
Carub.0007s0718 0.5kb downstream 0.5kb downstream 2707 true scaffold_7: 2641129-2643835 Capsella rubella
Carub.0007s0718 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2643336-2643835 Capsella rubella
Carub.0007s0718 1.0kb upstream 1.0kb upstream 3207 true scaffold_7: 2640129-2643335 Capsella rubella
Carub.0007s0718 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2640129-2641128 Capsella rubella
Carub.0007s0718 1.0kb downstream 1.0kb downstream 3207 true scaffold_7: 2641129-2644335 Capsella rubella
Carub.0007s0718 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2643336-2644335 Capsella rubella
Carub.0007s0718 2.0kb upstream 2.0kb upstream 4207 true scaffold_7: 2639129-2643335 Capsella rubella
Carub.0007s0718 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2639129-2641128 Capsella rubella
Carub.0007s0718 2.0kb downstream 2.0kb downstream 4207 true scaffold_7: 2641129-2645335 Capsella rubella
Carub.0007s0718 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2643336-2645335 Capsella rubella
Carub.0007s0718 5.0kb upstream 5.0kb upstream 7207 true scaffold_7: 2636129-2643335 Capsella rubella
Carub.0007s0718 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2636129-2641128 Capsella rubella
Carub.0007s0718 5.0kb downstream 5.0kb downstream 7207 true scaffold_7: 2641129-2648335 Capsella rubella
Carub.0007s0718 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2643336-2648335 Capsella rubella
Carub.0007s0718 10.0kb upstream 10.0kb upstream 12207 true scaffold_7: 2631129-2643335 Capsella rubella
Carub.0007s0718 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2631129-2641128 Capsella rubella
Carub.0007s0718 10.0kb downstream 10.0kb downstream 12207 true scaffold_7: 2641129-2653335 Capsella rubella
Carub.0007s0718 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2643336-2653335 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335388 5261 Brassicaceae Singleton cluster - no MSA
123776157 5264 Brassicales-Malvales Singleton cluster - no MSA
124274551 5266 SBM Singleton cluster - no MSA
124253027 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain