Gene : Carub.0007s0730 C. rubella v1.1
Defline:  (1 of 1) 1.5.1.7 - Saccharopine dehydrogenase (NAD(+), L-lysine-forming) / Lysine-2-oxoglutarate reductase Genomic Order:  730
Name:  ? Carub.0007s0730 Secondary Identifier:  ? PAC:39234596
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LYSINE-DEG1-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0730 0.5kb upstream 0.5kb upstream 7230 true scaffold_7: 2708338-2715567 Capsella rubella
Carub.0007s0730 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2708338-2708837 Capsella rubella
Carub.0007s0730 0.5kb downstream 0.5kb downstream 7230 true scaffold_7: 2708838-2716067 Capsella rubella
Carub.0007s0730 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2715568-2716067 Capsella rubella
Carub.0007s0730 1.0kb upstream 1.0kb upstream 7730 true scaffold_7: 2707838-2715567 Capsella rubella
Carub.0007s0730 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2707838-2708837 Capsella rubella
Carub.0007s0730 1.0kb downstream 1.0kb downstream 7730 true scaffold_7: 2708838-2716567 Capsella rubella
Carub.0007s0730 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2715568-2716567 Capsella rubella
Carub.0007s0730 2.0kb upstream 2.0kb upstream 8730 true scaffold_7: 2706838-2715567 Capsella rubella
Carub.0007s0730 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2706838-2708837 Capsella rubella
Carub.0007s0730 2.0kb downstream 2.0kb downstream 8730 true scaffold_7: 2708838-2717567 Capsella rubella
Carub.0007s0730 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2715568-2717567 Capsella rubella
Carub.0007s0730 5.0kb upstream 5.0kb upstream 11730 true scaffold_7: 2703838-2715567 Capsella rubella
Carub.0007s0730 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2703838-2708837 Capsella rubella
Carub.0007s0730 5.0kb downstream 5.0kb downstream 11730 true scaffold_7: 2708838-2720567 Capsella rubella
Carub.0007s0730 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2715568-2720567 Capsella rubella
Carub.0007s0730 10.0kb upstream 10.0kb upstream 16730 true scaffold_7: 2698838-2715567 Capsella rubella
Carub.0007s0730 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2698838-2708837 Capsella rubella
Carub.0007s0730 10.0kb downstream 10.0kb downstream 16730 true scaffold_7: 2708838-2725567 Capsella rubella
Carub.0007s0730 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2715568-2725567 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374841 5261 Brassicaceae View MSA
123837838 5264 Brassicales-Malvales View MSA
124346514 5266 SBM View MSA
124249986 5268 Malvidae View MSA
124068901 5270 Rosid View MSA
123736723 5271 Pentapetalae View MSA
122787907 5272 Eudicot View MSA
122047432 5273 Angiosperm View MSA
121344808 5274 Embryophyte View MSA
123380103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain