Gene : Carub.0007s0747 C. rubella v1.1
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  747
Name:  ? Carub.0007s0747 Secondary Identifier:  ? PAC:39235777
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLYCINE-SYN2-PWY Capsella rubella pathologic  
Crubella GLYCLEAV-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0747 0.5kb upstream 0.5kb upstream 5184 true scaffold_7: 2780313-2785496 Capsella rubella
Carub.0007s0747 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2780313-2780812 Capsella rubella
Carub.0007s0747 0.5kb downstream 0.5kb downstream 5184 true scaffold_7: 2780813-2785996 Capsella rubella
Carub.0007s0747 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2785497-2785996 Capsella rubella
Carub.0007s0747 1.0kb upstream 1.0kb upstream 5684 true scaffold_7: 2779813-2785496 Capsella rubella
Carub.0007s0747 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2779813-2780812 Capsella rubella
Carub.0007s0747 1.0kb downstream 1.0kb downstream 5684 true scaffold_7: 2780813-2786496 Capsella rubella
Carub.0007s0747 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2785497-2786496 Capsella rubella
Carub.0007s0747 2.0kb upstream 2.0kb upstream 6684 true scaffold_7: 2778813-2785496 Capsella rubella
Carub.0007s0747 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2778813-2780812 Capsella rubella
Carub.0007s0747 2.0kb downstream 2.0kb downstream 6684 true scaffold_7: 2780813-2787496 Capsella rubella
Carub.0007s0747 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2785497-2787496 Capsella rubella
Carub.0007s0747 5.0kb upstream 5.0kb upstream 9684 true scaffold_7: 2775813-2785496 Capsella rubella
Carub.0007s0747 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2775813-2780812 Capsella rubella
Carub.0007s0747 5.0kb downstream 5.0kb downstream 9684 true scaffold_7: 2780813-2790496 Capsella rubella
Carub.0007s0747 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2785497-2790496 Capsella rubella
Carub.0007s0747 10.0kb upstream 10.0kb upstream 14684 true scaffold_7: 2770813-2785496 Capsella rubella
Carub.0007s0747 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2770813-2780812 Capsella rubella
Carub.0007s0747 10.0kb downstream 10.0kb downstream 14684 true scaffold_7: 2780813-2795496 Capsella rubella
Carub.0007s0747 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2785497-2795496 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371110 5261 Brassicaceae View MSA
123828979 5264 Brassicales-Malvales View MSA
124346734 5266 SBM View MSA
124253029 5268 Malvidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain