Gene : Carub.0007s0125 C. rubella v1.1
Defline:  (1 of 3) 2.4.1.12//2.4.1.29 - Cellulose synthase (UDP-forming) / UDP-glucose-cellulose glucosyltransferase // Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  125
Name:  ? Carub.0007s0125 Secondary Identifier:  ? PAC:39232172
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1001 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0125 0.5kb upstream 0.5kb upstream 6200 true scaffold_7: 438835-445034 Capsella rubella
Carub.0007s0125 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 438835-439334 Capsella rubella
Carub.0007s0125 0.5kb downstream 0.5kb downstream 6200 true scaffold_7: 439335-445534 Capsella rubella
Carub.0007s0125 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 445035-445534 Capsella rubella
Carub.0007s0125 1.0kb upstream 1.0kb upstream 6700 true scaffold_7: 438335-445034 Capsella rubella
Carub.0007s0125 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 438335-439334 Capsella rubella
Carub.0007s0125 1.0kb downstream 1.0kb downstream 6700 true scaffold_7: 439335-446034 Capsella rubella
Carub.0007s0125 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 445035-446034 Capsella rubella
Carub.0007s0125 2.0kb upstream 2.0kb upstream 7700 true scaffold_7: 437335-445034 Capsella rubella
Carub.0007s0125 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 437335-439334 Capsella rubella
Carub.0007s0125 2.0kb downstream 2.0kb downstream 7700 true scaffold_7: 439335-447034 Capsella rubella
Carub.0007s0125 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 445035-447034 Capsella rubella
Carub.0007s0125 5.0kb upstream 5.0kb upstream 10700 true scaffold_7: 434335-445034 Capsella rubella
Carub.0007s0125 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 434335-439334 Capsella rubella
Carub.0007s0125 5.0kb downstream 5.0kb downstream 10700 true scaffold_7: 439335-450034 Capsella rubella
Carub.0007s0125 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 445035-450034 Capsella rubella
Carub.0007s0125 10.0kb upstream 10.0kb upstream 15700 true scaffold_7: 429335-445034 Capsella rubella
Carub.0007s0125 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 429335-439334 Capsella rubella
Carub.0007s0125 10.0kb downstream 10.0kb downstream 15700 true scaffold_7: 439335-455034 Capsella rubella
Carub.0007s0125 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 445035-455034 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377328 5261 Brassicaceae View MSA
123839580 5264 Brassicales-Malvales View MSA
124351037 5266 SBM View MSA
124248532 5268 Malvidae View MSA
124071949 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain