Gene : Carub.0007s0540 C. rubella v1.1
Defline:  (1 of 1) 1.17.1.4 - Xanthine dehydrogenase / Xanthine/NAD(+) oxidoreductase Genomic Order:  540
Name:  ? Carub.0007s0540 Secondary Identifier:  ? PAC:39233794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6596 Capsella rubella pathologic  
Crubella PWY-6606 Capsella rubella pathologic  
Crubella PWY-6608 Capsella rubella pathologic  
Crubella SALVADEHYPOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0540 0.5kb upstream 0.5kb upstream 7105 true scaffold_7: 2039220-2046324 Capsella rubella
Carub.0007s0540 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2039220-2039719 Capsella rubella
Carub.0007s0540 0.5kb downstream 0.5kb downstream 7105 true scaffold_7: 2039720-2046824 Capsella rubella
Carub.0007s0540 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2046325-2046824 Capsella rubella
Carub.0007s0540 1.0kb upstream 1.0kb upstream 7605 true scaffold_7: 2038720-2046324 Capsella rubella
Carub.0007s0540 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2038720-2039719 Capsella rubella
Carub.0007s0540 1.0kb downstream 1.0kb downstream 7605 true scaffold_7: 2039720-2047324 Capsella rubella
Carub.0007s0540 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2046325-2047324 Capsella rubella
Carub.0007s0540 2.0kb upstream 2.0kb upstream 8605 true scaffold_7: 2037720-2046324 Capsella rubella
Carub.0007s0540 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2037720-2039719 Capsella rubella
Carub.0007s0540 2.0kb downstream 2.0kb downstream 8605 true scaffold_7: 2039720-2048324 Capsella rubella
Carub.0007s0540 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2046325-2048324 Capsella rubella
Carub.0007s0540 5.0kb upstream 5.0kb upstream 11605 true scaffold_7: 2034720-2046324 Capsella rubella
Carub.0007s0540 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2034720-2039719 Capsella rubella
Carub.0007s0540 5.0kb downstream 5.0kb downstream 11605 true scaffold_7: 2039720-2051324 Capsella rubella
Carub.0007s0540 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2046325-2051324 Capsella rubella
Carub.0007s0540 10.0kb upstream 10.0kb upstream 16605 true scaffold_7: 2029720-2046324 Capsella rubella
Carub.0007s0540 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2029720-2039719 Capsella rubella
Carub.0007s0540 10.0kb downstream 10.0kb downstream 16605 true scaffold_7: 2039720-2056324 Capsella rubella
Carub.0007s0540 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2046325-2056324 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368342 5261 Brassicaceae View MSA
123840481 5264 Brassicales-Malvales View MSA
124343670 5266 SBM View MSA
124237947 5268 Malvidae View MSA
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain