Gene : Carub.0007s0440 C. rubella v1.1
Defline:  (1 of 1) PTHR11670//PTHR11670:SF40 - ACONITASE // ACONITATE HYDRATASE 1 Genomic Order:  440
Name:  ? Carub.0007s0440 Secondary Identifier:  ? PAC:39233635
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLYOXYLATE-BYPASS Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-5690 Capsella rubella pathologic  
Crubella PWY-6549 Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0440 0.5kb upstream 0.5kb upstream 5915 true scaffold_7: 1662662-1668576 Capsella rubella
Carub.0007s0440 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1662662-1663161 Capsella rubella
Carub.0007s0440 0.5kb downstream 0.5kb downstream 5915 true scaffold_7: 1663162-1669076 Capsella rubella
Carub.0007s0440 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1668577-1669076 Capsella rubella
Carub.0007s0440 1.0kb upstream 1.0kb upstream 6415 true scaffold_7: 1662162-1668576 Capsella rubella
Carub.0007s0440 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1662162-1663161 Capsella rubella
Carub.0007s0440 1.0kb downstream 1.0kb downstream 6415 true scaffold_7: 1663162-1669576 Capsella rubella
Carub.0007s0440 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1668577-1669576 Capsella rubella
Carub.0007s0440 2.0kb upstream 2.0kb upstream 7415 true scaffold_7: 1661162-1668576 Capsella rubella
Carub.0007s0440 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1661162-1663161 Capsella rubella
Carub.0007s0440 2.0kb downstream 2.0kb downstream 7415 true scaffold_7: 1663162-1670576 Capsella rubella
Carub.0007s0440 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1668577-1670576 Capsella rubella
Carub.0007s0440 5.0kb upstream 5.0kb upstream 10415 true scaffold_7: 1658162-1668576 Capsella rubella
Carub.0007s0440 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1658162-1663161 Capsella rubella
Carub.0007s0440 5.0kb downstream 5.0kb downstream 10415 true scaffold_7: 1663162-1673576 Capsella rubella
Carub.0007s0440 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1668577-1673576 Capsella rubella
Carub.0007s0440 10.0kb upstream 10.0kb upstream 15415 true scaffold_7: 1653162-1668576 Capsella rubella
Carub.0007s0440 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1653162-1663161 Capsella rubella
Carub.0007s0440 10.0kb downstream 10.0kb downstream 15415 true scaffold_7: 1663162-1678576 Capsella rubella
Carub.0007s0440 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1668577-1678576 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379394 5261 Brassicaceae View MSA
123836959 5264 Brassicales-Malvales View MSA
124346925 5266 SBM View MSA
124245948 5268 Malvidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain