Gene : Carub.0007s0444 C. rubella v1.1
Defline:  (1 of 1) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  444
Name:  ? Carub.0007s0444 Secondary Identifier:  ? PAC:39235357
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  
Crubella PWY-3561 Capsella rubella pathologic  
Crubella PWY-7039 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0444 0.5kb upstream 0.5kb upstream 4586 true scaffold_7: 1681635-1686220 Capsella rubella
Carub.0007s0444 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1681635-1682134 Capsella rubella
Carub.0007s0444 0.5kb downstream 0.5kb downstream 4586 true scaffold_7: 1682135-1686720 Capsella rubella
Carub.0007s0444 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1686221-1686720 Capsella rubella
Carub.0007s0444 1.0kb upstream 1.0kb upstream 5086 true scaffold_7: 1681135-1686220 Capsella rubella
Carub.0007s0444 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1681135-1682134 Capsella rubella
Carub.0007s0444 1.0kb downstream 1.0kb downstream 5086 true scaffold_7: 1682135-1687220 Capsella rubella
Carub.0007s0444 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1686221-1687220 Capsella rubella
Carub.0007s0444 2.0kb upstream 2.0kb upstream 6086 true scaffold_7: 1680135-1686220 Capsella rubella
Carub.0007s0444 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1680135-1682134 Capsella rubella
Carub.0007s0444 2.0kb downstream 2.0kb downstream 6086 true scaffold_7: 1682135-1688220 Capsella rubella
Carub.0007s0444 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1686221-1688220 Capsella rubella
Carub.0007s0444 5.0kb upstream 5.0kb upstream 9086 true scaffold_7: 1677135-1686220 Capsella rubella
Carub.0007s0444 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1677135-1682134 Capsella rubella
Carub.0007s0444 5.0kb downstream 5.0kb downstream 9086 true scaffold_7: 1682135-1691220 Capsella rubella
Carub.0007s0444 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1686221-1691220 Capsella rubella
Carub.0007s0444 10.0kb upstream 10.0kb upstream 14086 true scaffold_7: 1672135-1686220 Capsella rubella
Carub.0007s0444 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1672135-1682134 Capsella rubella
Carub.0007s0444 10.0kb downstream 10.0kb downstream 14086 true scaffold_7: 1682135-1696220 Capsella rubella
Carub.0007s0444 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1686221-1696220 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373101 5261 Brassicaceae View MSA
123831144 5264 Brassicales-Malvales View MSA
124343359 5266 SBM View MSA
124240959 5268 Malvidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain