Gene : Carub.0007s0062 C. rubella v1.1
Defline:  (1 of 20) PTHR23201 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  62
Name:  ? Carub.0007s0062 Secondary Identifier:  ? PAC:39232265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0062 0.5kb upstream 0.5kb upstream 2390 true scaffold_7: 235268-237657 Capsella rubella
Carub.0007s0062 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 237158-237657 Capsella rubella
Carub.0007s0062 0.5kb downstream 0.5kb downstream 2390 true scaffold_7: 234768-237157 Capsella rubella
Carub.0007s0062 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 234768-235267 Capsella rubella
Carub.0007s0062 1.0kb upstream 1.0kb upstream 2890 true scaffold_7: 235268-238157 Capsella rubella
Carub.0007s0062 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 237158-238157 Capsella rubella
Carub.0007s0062 1.0kb downstream 1.0kb downstream 2890 true scaffold_7: 234268-237157 Capsella rubella
Carub.0007s0062 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 234268-235267 Capsella rubella
Carub.0007s0062 2.0kb upstream 2.0kb upstream 3890 true scaffold_7: 235268-239157 Capsella rubella
Carub.0007s0062 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 237158-239157 Capsella rubella
Carub.0007s0062 2.0kb downstream 2.0kb downstream 3890 true scaffold_7: 233268-237157 Capsella rubella
Carub.0007s0062 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 233268-235267 Capsella rubella
Carub.0007s0062 5.0kb upstream 5.0kb upstream 6890 true scaffold_7: 235268-242157 Capsella rubella
Carub.0007s0062 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 237158-242157 Capsella rubella
Carub.0007s0062 5.0kb downstream 5.0kb downstream 6890 true scaffold_7: 230268-237157 Capsella rubella
Carub.0007s0062 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 230268-235267 Capsella rubella
Carub.0007s0062 10.0kb upstream 10.0kb upstream 11890 true scaffold_7: 235268-247157 Capsella rubella
Carub.0007s0062 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 237158-247157 Capsella rubella
Carub.0007s0062 10.0kb downstream 10.0kb downstream 11890 true scaffold_7: 225268-237157 Capsella rubella
Carub.0007s0062 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 225268-235267 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367761 5261 Brassicaceae View MSA
123833918 5264 Brassicales-Malvales View MSA
124346765 5266 SBM View MSA
124251474 5268 Malvidae View MSA
124071058 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain