Gene : Carub.0007s0066 C. rubella v1.1
Defline:  (1 of 1) PTHR34574//PTHR34574:SF2 - FAMILY NOT NAMED // EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  66
Name:  ? Carub.0007s0066 Secondary Identifier:  ? PAC:39232185
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0066 0.5kb upstream 0.5kb upstream 2301 true scaffold_7: 248212-250512 Capsella rubella
Carub.0007s0066 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 250013-250512 Capsella rubella
Carub.0007s0066 0.5kb downstream 0.5kb downstream 2301 true scaffold_7: 247712-250012 Capsella rubella
Carub.0007s0066 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 247712-248211 Capsella rubella
Carub.0007s0066 1.0kb upstream 1.0kb upstream 2801 true scaffold_7: 248212-251012 Capsella rubella
Carub.0007s0066 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 250013-251012 Capsella rubella
Carub.0007s0066 1.0kb downstream 1.0kb downstream 2801 true scaffold_7: 247212-250012 Capsella rubella
Carub.0007s0066 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 247212-248211 Capsella rubella
Carub.0007s0066 2.0kb upstream 2.0kb upstream 3801 true scaffold_7: 248212-252012 Capsella rubella
Carub.0007s0066 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 250013-252012 Capsella rubella
Carub.0007s0066 2.0kb downstream 2.0kb downstream 3801 true scaffold_7: 246212-250012 Capsella rubella
Carub.0007s0066 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 246212-248211 Capsella rubella
Carub.0007s0066 5.0kb upstream 5.0kb upstream 6801 true scaffold_7: 248212-255012 Capsella rubella
Carub.0007s0066 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 250013-255012 Capsella rubella
Carub.0007s0066 5.0kb downstream 5.0kb downstream 6801 true scaffold_7: 243212-250012 Capsella rubella
Carub.0007s0066 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 243212-248211 Capsella rubella
Carub.0007s0066 10.0kb upstream 10.0kb upstream 11801 true scaffold_7: 248212-260012 Capsella rubella
Carub.0007s0066 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 250013-260012 Capsella rubella
Carub.0007s0066 10.0kb downstream 10.0kb downstream 11801 true scaffold_7: 238212-250012 Capsella rubella
Carub.0007s0066 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 238212-248211 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335355 5261 Brassicaceae Singleton cluster - no MSA
123843018 5264 Brassicales-Malvales View MSA
124323938 5266 SBM View MSA
124252687 5268 Malvidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain