Gene : Carub.0007s0109 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  109
Name:  ? Carub.0007s0109 Secondary Identifier:  ? PAC:39233358
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0109 0.5kb upstream 0.5kb upstream 3856 true scaffold_7: 396205-400060 Capsella rubella
Carub.0007s0109 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 399561-400060 Capsella rubella
Carub.0007s0109 0.5kb downstream 0.5kb downstream 3856 true scaffold_7: 395705-399560 Capsella rubella
Carub.0007s0109 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 395705-396204 Capsella rubella
Carub.0007s0109 1.0kb upstream 1.0kb upstream 4356 true scaffold_7: 396205-400560 Capsella rubella
Carub.0007s0109 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 399561-400560 Capsella rubella
Carub.0007s0109 1.0kb downstream 1.0kb downstream 4356 true scaffold_7: 395205-399560 Capsella rubella
Carub.0007s0109 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 395205-396204 Capsella rubella
Carub.0007s0109 2.0kb upstream 2.0kb upstream 5356 true scaffold_7: 396205-401560 Capsella rubella
Carub.0007s0109 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 399561-401560 Capsella rubella
Carub.0007s0109 2.0kb downstream 2.0kb downstream 5356 true scaffold_7: 394205-399560 Capsella rubella
Carub.0007s0109 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 394205-396204 Capsella rubella
Carub.0007s0109 5.0kb upstream 5.0kb upstream 8356 true scaffold_7: 396205-404560 Capsella rubella
Carub.0007s0109 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 399561-404560 Capsella rubella
Carub.0007s0109 5.0kb downstream 5.0kb downstream 8356 true scaffold_7: 391205-399560 Capsella rubella
Carub.0007s0109 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 391205-396204 Capsella rubella
Carub.0007s0109 10.0kb upstream 10.0kb upstream 13356 true scaffold_7: 396205-409560 Capsella rubella
Carub.0007s0109 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 399561-409560 Capsella rubella
Carub.0007s0109 10.0kb downstream 10.0kb downstream 13356 true scaffold_7: 386205-399560 Capsella rubella
Carub.0007s0109 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 386205-396204 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374652 5261 Brassicaceae View MSA
123828770 5264 Brassicales-Malvales View MSA
124338071 5266 SBM View MSA
124246934 5268 Malvidae View MSA
124061137 5270 Rosid View MSA
123742346 5271 Pentapetalae View MSA
122794962 5272 Eudicot View MSA
122044957 5273 Angiosperm View MSA
121352585 5274 Embryophyte View MSA
123382887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain