Gene : Carub.0007s0110 C. rubella v1.1
Defline:  (1 of 13) PTHR33147//PTHR33147:SF4 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 13-RELATED Genomic Order:  110
Name:  ? Carub.0007s0110 Secondary Identifier:  ? PAC:39234914
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0110 0.5kb upstream 0.5kb upstream 845 true scaffold_7: 399584-400428 Capsella rubella
Carub.0007s0110 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 399584-400083 Capsella rubella
Carub.0007s0110 0.5kb downstream 0.5kb downstream 845 true scaffold_7: 400084-400928 Capsella rubella
Carub.0007s0110 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 400429-400928 Capsella rubella
Carub.0007s0110 1.0kb upstream 1.0kb upstream 1345 true scaffold_7: 399084-400428 Capsella rubella
Carub.0007s0110 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 399084-400083 Capsella rubella
Carub.0007s0110 1.0kb downstream 1.0kb downstream 1345 true scaffold_7: 400084-401428 Capsella rubella
Carub.0007s0110 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 400429-401428 Capsella rubella
Carub.0007s0110 2.0kb upstream 2.0kb upstream 2345 true scaffold_7: 398084-400428 Capsella rubella
Carub.0007s0110 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 398084-400083 Capsella rubella
Carub.0007s0110 2.0kb downstream 2.0kb downstream 2345 true scaffold_7: 400084-402428 Capsella rubella
Carub.0007s0110 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 400429-402428 Capsella rubella
Carub.0007s0110 5.0kb upstream 5.0kb upstream 5345 true scaffold_7: 395084-400428 Capsella rubella
Carub.0007s0110 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 395084-400083 Capsella rubella
Carub.0007s0110 5.0kb downstream 5.0kb downstream 5345 true scaffold_7: 400084-405428 Capsella rubella
Carub.0007s0110 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 400429-405428 Capsella rubella
Carub.0007s0110 10.0kb upstream 10.0kb upstream 10345 true scaffold_7: 390084-400428 Capsella rubella
Carub.0007s0110 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 390084-400083 Capsella rubella
Carub.0007s0110 10.0kb downstream 10.0kb downstream 10345 true scaffold_7: 400084-410428 Capsella rubella
Carub.0007s0110 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 400429-410428 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365210 5261 Brassicaceae View MSA
123839018 5264 Brassicales-Malvales View MSA
124350774 5266 SBM View MSA
124244844 5268 Malvidae View MSA
124038953 5270 Rosid View MSA
123744676 5271 Pentapetalae View MSA
122797517 5272 Eudicot View MSA
122049693 5273 Angiosperm View MSA
121311546 5274 Embryophyte View MSA
123348829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain