Gene : Carub.0007s0347 C. rubella v1.1
Defline:  (1 of 1) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  347
Name:  ? Carub.0007s0347 Secondary Identifier:  ? PAC:39232291
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0347 0.5kb upstream 0.5kb upstream 3031 true scaffold_7: 1281140-1284170 Capsella rubella
Carub.0007s0347 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1281140-1281639 Capsella rubella
Carub.0007s0347 0.5kb downstream 0.5kb downstream 3031 true scaffold_7: 1281640-1284670 Capsella rubella
Carub.0007s0347 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1284171-1284670 Capsella rubella
Carub.0007s0347 1.0kb upstream 1.0kb upstream 3531 true scaffold_7: 1280640-1284170 Capsella rubella
Carub.0007s0347 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1280640-1281639 Capsella rubella
Carub.0007s0347 1.0kb downstream 1.0kb downstream 3531 true scaffold_7: 1281640-1285170 Capsella rubella
Carub.0007s0347 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1284171-1285170 Capsella rubella
Carub.0007s0347 2.0kb upstream 2.0kb upstream 4531 true scaffold_7: 1279640-1284170 Capsella rubella
Carub.0007s0347 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1279640-1281639 Capsella rubella
Carub.0007s0347 2.0kb downstream 2.0kb downstream 4531 true scaffold_7: 1281640-1286170 Capsella rubella
Carub.0007s0347 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1284171-1286170 Capsella rubella
Carub.0007s0347 5.0kb upstream 5.0kb upstream 7531 true scaffold_7: 1276640-1284170 Capsella rubella
Carub.0007s0347 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1276640-1281639 Capsella rubella
Carub.0007s0347 5.0kb downstream 5.0kb downstream 7531 true scaffold_7: 1281640-1289170 Capsella rubella
Carub.0007s0347 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1284171-1289170 Capsella rubella
Carub.0007s0347 10.0kb upstream 10.0kb upstream 12531 true scaffold_7: 1271640-1284170 Capsella rubella
Carub.0007s0347 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1271640-1281639 Capsella rubella
Carub.0007s0347 10.0kb downstream 10.0kb downstream 12531 true scaffold_7: 1281640-1294170 Capsella rubella
Carub.0007s0347 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1284171-1294170 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374415 5261 Brassicaceae View MSA
123833507 5264 Brassicales-Malvales View MSA
124346212 5266 SBM View MSA
124242114 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain