Gene : Carub.0007s0357 C. rubella v1.1
Defline:  (1 of 1) PTHR30546:SF3 - MINOR ALLERGEN Genomic Order:  357
Name:  ? Carub.0007s0357 Secondary Identifier:  ? PAC:39235242
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7279 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0357 0.5kb upstream 0.5kb upstream 2558 true scaffold_7: 1311490-1314047 Capsella rubella
Carub.0007s0357 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1313548-1314047 Capsella rubella
Carub.0007s0357 0.5kb downstream 0.5kb downstream 2558 true scaffold_7: 1310990-1313547 Capsella rubella
Carub.0007s0357 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1310990-1311489 Capsella rubella
Carub.0007s0357 1.0kb upstream 1.0kb upstream 3058 true scaffold_7: 1311490-1314547 Capsella rubella
Carub.0007s0357 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1313548-1314547 Capsella rubella
Carub.0007s0357 1.0kb downstream 1.0kb downstream 3058 true scaffold_7: 1310490-1313547 Capsella rubella
Carub.0007s0357 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1310490-1311489 Capsella rubella
Carub.0007s0357 2.0kb upstream 2.0kb upstream 4058 true scaffold_7: 1311490-1315547 Capsella rubella
Carub.0007s0357 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1313548-1315547 Capsella rubella
Carub.0007s0357 2.0kb downstream 2.0kb downstream 4058 true scaffold_7: 1309490-1313547 Capsella rubella
Carub.0007s0357 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1309490-1311489 Capsella rubella
Carub.0007s0357 5.0kb upstream 5.0kb upstream 7058 true scaffold_7: 1311490-1318547 Capsella rubella
Carub.0007s0357 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1313548-1318547 Capsella rubella
Carub.0007s0357 5.0kb downstream 5.0kb downstream 7058 true scaffold_7: 1306490-1313547 Capsella rubella
Carub.0007s0357 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1306490-1311489 Capsella rubella
Carub.0007s0357 10.0kb upstream 10.0kb upstream 12058 true scaffold_7: 1311490-1323547 Capsella rubella
Carub.0007s0357 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1313548-1323547 Capsella rubella
Carub.0007s0357 10.0kb downstream 10.0kb downstream 12058 true scaffold_7: 1301490-1313547 Capsella rubella
Carub.0007s0357 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1301490-1311489 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371189 5261 Brassicaceae View MSA
123830075 5264 Brassicales-Malvales View MSA
124345822 5266 SBM View MSA
124254068 5268 Malvidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain