Gene : Carub.0007s0372 C. rubella v1.1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF838 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  372
Name:  ? Carub.0007s0372 Secondary Identifier:  ? PAC:39235527
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  
Crubella PWY-7420 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0372 0.5kb upstream 0.5kb upstream 2701 true scaffold_7: 1373610-1376310 Capsella rubella
Carub.0007s0372 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1373610-1374109 Capsella rubella
Carub.0007s0372 0.5kb downstream 0.5kb downstream 2701 true scaffold_7: 1374110-1376810 Capsella rubella
Carub.0007s0372 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1376311-1376810 Capsella rubella
Carub.0007s0372 1.0kb upstream 1.0kb upstream 3201 true scaffold_7: 1373110-1376310 Capsella rubella
Carub.0007s0372 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1373110-1374109 Capsella rubella
Carub.0007s0372 1.0kb downstream 1.0kb downstream 3201 true scaffold_7: 1374110-1377310 Capsella rubella
Carub.0007s0372 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1376311-1377310 Capsella rubella
Carub.0007s0372 2.0kb upstream 2.0kb upstream 4201 true scaffold_7: 1372110-1376310 Capsella rubella
Carub.0007s0372 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1372110-1374109 Capsella rubella
Carub.0007s0372 2.0kb downstream 2.0kb downstream 4201 true scaffold_7: 1374110-1378310 Capsella rubella
Carub.0007s0372 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1376311-1378310 Capsella rubella
Carub.0007s0372 5.0kb upstream 5.0kb upstream 7201 true scaffold_7: 1369110-1376310 Capsella rubella
Carub.0007s0372 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1369110-1374109 Capsella rubella
Carub.0007s0372 5.0kb downstream 5.0kb downstream 7201 true scaffold_7: 1374110-1381310 Capsella rubella
Carub.0007s0372 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1376311-1381310 Capsella rubella
Carub.0007s0372 10.0kb upstream 10.0kb upstream 12201 true scaffold_7: 1364110-1376310 Capsella rubella
Carub.0007s0372 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1364110-1374109 Capsella rubella
Carub.0007s0372 10.0kb downstream 10.0kb downstream 12201 true scaffold_7: 1374110-1386310 Capsella rubella
Carub.0007s0372 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1376311-1386310 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365171 5261 Brassicaceae View MSA
123835615 5264 Brassicales-Malvales View MSA
124337239 5266 SBM View MSA
124245077 5268 Malvidae View MSA
124060734 5270 Rosid View MSA
123741073 5271 Pentapetalae View MSA
122790529 5272 Eudicot View MSA
122043617 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain