Gene : Carub.0007s0227 C. rubella v1.1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Genomic Order:  227
Name:  ? Carub.0007s0227 Secondary Identifier:  ? PAC:39232189
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0227 0.5kb upstream 0.5kb upstream 3565 true scaffold_7: 785491-789055 Capsella rubella
Carub.0007s0227 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 785491-785990 Capsella rubella
Carub.0007s0227 0.5kb downstream 0.5kb downstream 3565 true scaffold_7: 785991-789555 Capsella rubella
Carub.0007s0227 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 789056-789555 Capsella rubella
Carub.0007s0227 1.0kb upstream 1.0kb upstream 4065 true scaffold_7: 784991-789055 Capsella rubella
Carub.0007s0227 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 784991-785990 Capsella rubella
Carub.0007s0227 1.0kb downstream 1.0kb downstream 4065 true scaffold_7: 785991-790055 Capsella rubella
Carub.0007s0227 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 789056-790055 Capsella rubella
Carub.0007s0227 2.0kb upstream 2.0kb upstream 5065 true scaffold_7: 783991-789055 Capsella rubella
Carub.0007s0227 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 783991-785990 Capsella rubella
Carub.0007s0227 2.0kb downstream 2.0kb downstream 5065 true scaffold_7: 785991-791055 Capsella rubella
Carub.0007s0227 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 789056-791055 Capsella rubella
Carub.0007s0227 5.0kb upstream 5.0kb upstream 8065 true scaffold_7: 780991-789055 Capsella rubella
Carub.0007s0227 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 780991-785990 Capsella rubella
Carub.0007s0227 5.0kb downstream 5.0kb downstream 8065 true scaffold_7: 785991-794055 Capsella rubella
Carub.0007s0227 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 789056-794055 Capsella rubella
Carub.0007s0227 10.0kb upstream 10.0kb upstream 13065 true scaffold_7: 775991-789055 Capsella rubella
Carub.0007s0227 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 775991-785990 Capsella rubella
Carub.0007s0227 10.0kb downstream 10.0kb downstream 13065 true scaffold_7: 785991-799055 Capsella rubella
Carub.0007s0227 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 789056-799055 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378598 5261 Brassicaceae View MSA
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain