Gene : Carub.0006s3558 C. rubella v1.1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  3558
Name:  ? Carub.0006s3558 Secondary Identifier:  ? PAC:39246690
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3558 0.5kb upstream 0.5kb upstream 2894 true scaffold_6: 15982266-15985159 Capsella rubella
Carub.0006s3558 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15984660-15985159 Capsella rubella
Carub.0006s3558 0.5kb downstream 0.5kb downstream 2894 true scaffold_6: 15981766-15984659 Capsella rubella
Carub.0006s3558 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15981766-15982265 Capsella rubella
Carub.0006s3558 1.0kb upstream 1.0kb upstream 3394 true scaffold_6: 15982266-15985659 Capsella rubella
Carub.0006s3558 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15984660-15985659 Capsella rubella
Carub.0006s3558 1.0kb downstream 1.0kb downstream 3394 true scaffold_6: 15981266-15984659 Capsella rubella
Carub.0006s3558 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15981266-15982265 Capsella rubella
Carub.0006s3558 2.0kb upstream 2.0kb upstream 4394 true scaffold_6: 15982266-15986659 Capsella rubella
Carub.0006s3558 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15984660-15986659 Capsella rubella
Carub.0006s3558 2.0kb downstream 2.0kb downstream 4394 true scaffold_6: 15980266-15984659 Capsella rubella
Carub.0006s3558 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15980266-15982265 Capsella rubella
Carub.0006s3558 5.0kb upstream 5.0kb upstream 7394 true scaffold_6: 15982266-15989659 Capsella rubella
Carub.0006s3558 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15984660-15989659 Capsella rubella
Carub.0006s3558 5.0kb downstream 5.0kb downstream 7394 true scaffold_6: 15977266-15984659 Capsella rubella
Carub.0006s3558 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15977266-15982265 Capsella rubella
Carub.0006s3558 10.0kb upstream 10.0kb upstream 12394 true scaffold_6: 15982266-15994659 Capsella rubella
Carub.0006s3558 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15984660-15994659 Capsella rubella
Carub.0006s3558 10.0kb downstream 10.0kb downstream 12394 true scaffold_6: 15972266-15984659 Capsella rubella
Carub.0006s3558 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15972266-15982265 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368081 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain