Gene : Carub.0006s3559 C. rubella v1.1
Defline:  (1 of 1) PTHR31969//PTHR31969:SF9 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 2 Genomic Order:  3559
Name:  ? Carub.0006s3559 Secondary Identifier:  ? PAC:39249848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3559 0.5kb upstream 0.5kb upstream 1891 true scaffold_6: 15985256-15987146 Capsella rubella
Carub.0006s3559 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15986647-15987146 Capsella rubella
Carub.0006s3559 0.5kb downstream 0.5kb downstream 1891 true scaffold_6: 15984756-15986646 Capsella rubella
Carub.0006s3559 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15984756-15985255 Capsella rubella
Carub.0006s3559 1.0kb upstream 1.0kb upstream 2391 true scaffold_6: 15985256-15987646 Capsella rubella
Carub.0006s3559 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15986647-15987646 Capsella rubella
Carub.0006s3559 1.0kb downstream 1.0kb downstream 2391 true scaffold_6: 15984256-15986646 Capsella rubella
Carub.0006s3559 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15984256-15985255 Capsella rubella
Carub.0006s3559 2.0kb upstream 2.0kb upstream 3391 true scaffold_6: 15985256-15988646 Capsella rubella
Carub.0006s3559 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15986647-15988646 Capsella rubella
Carub.0006s3559 2.0kb downstream 2.0kb downstream 3391 true scaffold_6: 15983256-15986646 Capsella rubella
Carub.0006s3559 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15983256-15985255 Capsella rubella
Carub.0006s3559 5.0kb upstream 5.0kb upstream 6391 true scaffold_6: 15985256-15991646 Capsella rubella
Carub.0006s3559 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15986647-15991646 Capsella rubella
Carub.0006s3559 5.0kb downstream 5.0kb downstream 6391 true scaffold_6: 15980256-15986646 Capsella rubella
Carub.0006s3559 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15980256-15985255 Capsella rubella
Carub.0006s3559 10.0kb upstream 10.0kb upstream 11391 true scaffold_6: 15985256-15996646 Capsella rubella
Carub.0006s3559 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15986647-15996646 Capsella rubella
Carub.0006s3559 10.0kb downstream 10.0kb downstream 11391 true scaffold_6: 15975256-15986646 Capsella rubella
Carub.0006s3559 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15975256-15985255 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365594 5261 Brassicaceae View MSA
123836734 5264 Brassicales-Malvales View MSA
124346748 5266 SBM View MSA
124250803 5268 Malvidae View MSA
124072428 5270 Rosid View MSA
123752568 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain