Gene : Carub.0007s0018 C. rubella v1.1
Defline:  (1 of 1) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  18
Name:  ? Carub.0007s0018 Secondary Identifier:  ? PAC:39235540
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7426 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0018 0.5kb upstream 0.5kb upstream 3940 true scaffold_7: 61074-65013 Capsella rubella
Carub.0007s0018 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 64514-65013 Capsella rubella
Carub.0007s0018 0.5kb downstream 0.5kb downstream 3940 true scaffold_7: 60574-64513 Capsella rubella
Carub.0007s0018 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 60574-61073 Capsella rubella
Carub.0007s0018 1.0kb upstream 1.0kb upstream 4440 true scaffold_7: 61074-65513 Capsella rubella
Carub.0007s0018 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 64514-65513 Capsella rubella
Carub.0007s0018 1.0kb downstream 1.0kb downstream 4440 true scaffold_7: 60074-64513 Capsella rubella
Carub.0007s0018 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 60074-61073 Capsella rubella
Carub.0007s0018 2.0kb upstream 2.0kb upstream 5440 true scaffold_7: 61074-66513 Capsella rubella
Carub.0007s0018 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 64514-66513 Capsella rubella
Carub.0007s0018 2.0kb downstream 2.0kb downstream 5440 true scaffold_7: 59074-64513 Capsella rubella
Carub.0007s0018 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 59074-61073 Capsella rubella
Carub.0007s0018 5.0kb upstream 5.0kb upstream 8440 true scaffold_7: 61074-69513 Capsella rubella
Carub.0007s0018 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 64514-69513 Capsella rubella
Carub.0007s0018 5.0kb downstream 5.0kb downstream 8440 true scaffold_7: 56074-64513 Capsella rubella
Carub.0007s0018 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 56074-61073 Capsella rubella
Carub.0007s0018 10.0kb upstream 10.0kb upstream 13440 true scaffold_7: 61074-74513 Capsella rubella
Carub.0007s0018 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 64514-74513 Capsella rubella
Carub.0007s0018 10.0kb downstream 10.0kb downstream 13440 true scaffold_7: 51074-64513 Capsella rubella
Carub.0007s0018 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 51074-61073 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371542 5261 Brassicaceae View MSA
123831005 5264 Brassicales-Malvales View MSA
124342265 5266 SBM View MSA
124241917 5268 Malvidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain