Gene : Carub.0006s3384 C. rubella v1.1
Defline:  (1 of 1) PTHR31062:SF11 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 9 Genomic Order:  3384
Name:  ? Carub.0006s3384 Secondary Identifier:  ? PAC:39249344
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3384 0.5kb upstream 0.5kb upstream 1799 true scaffold_6: 15273703-15275501 Capsella rubella
Carub.0006s3384 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15275002-15275501 Capsella rubella
Carub.0006s3384 0.5kb downstream 0.5kb downstream 1799 true scaffold_6: 15273203-15275001 Capsella rubella
Carub.0006s3384 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15273203-15273702 Capsella rubella
Carub.0006s3384 1.0kb upstream 1.0kb upstream 2299 true scaffold_6: 15273703-15276001 Capsella rubella
Carub.0006s3384 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15275002-15276001 Capsella rubella
Carub.0006s3384 1.0kb downstream 1.0kb downstream 2299 true scaffold_6: 15272703-15275001 Capsella rubella
Carub.0006s3384 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15272703-15273702 Capsella rubella
Carub.0006s3384 2.0kb upstream 2.0kb upstream 3299 true scaffold_6: 15273703-15277001 Capsella rubella
Carub.0006s3384 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15275002-15277001 Capsella rubella
Carub.0006s3384 2.0kb downstream 2.0kb downstream 3299 true scaffold_6: 15271703-15275001 Capsella rubella
Carub.0006s3384 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15271703-15273702 Capsella rubella
Carub.0006s3384 5.0kb upstream 5.0kb upstream 6299 true scaffold_6: 15273703-15280001 Capsella rubella
Carub.0006s3384 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15275002-15280001 Capsella rubella
Carub.0006s3384 5.0kb downstream 5.0kb downstream 6299 true scaffold_6: 15268703-15275001 Capsella rubella
Carub.0006s3384 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15268703-15273702 Capsella rubella
Carub.0006s3384 10.0kb upstream 10.0kb upstream 11299 true scaffold_6: 15273703-15285001 Capsella rubella
Carub.0006s3384 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15275002-15285001 Capsella rubella
Carub.0006s3384 10.0kb downstream 10.0kb downstream 11299 true scaffold_6: 15263703-15275001 Capsella rubella
Carub.0006s3384 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15263703-15273702 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373994 5261 Brassicaceae View MSA
123834930 5264 Brassicales-Malvales View MSA
124338559 5266 SBM View MSA
124238284 5268 Malvidae View MSA
124074045 5270 Rosid View MSA
123744569 5271 Pentapetalae View MSA
122789262 5272 Eudicot View MSA
122045078 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain