Gene : Carub.0006s3382 C. rubella v1.1

Defline:  (1 of 1) K19054 - frataxin (FXN) Genomic Order:  3382
Name:  ? Carub.0006s3382 Secondary Identifier:  ? PAC:39247124

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3382 0.5kb upstream 0.5kb upstream 1841 true scaffold_6: 15268701-15270541 Capsella rubella
Carub.0006s3382 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15268701-15269200 Capsella rubella
Carub.0006s3382 0.5kb downstream 0.5kb downstream 1841 true scaffold_6: 15269201-15271041 Capsella rubella
Carub.0006s3382 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15270542-15271041 Capsella rubella
Carub.0006s3382 1.0kb upstream 1.0kb upstream 2341 true scaffold_6: 15268201-15270541 Capsella rubella
Carub.0006s3382 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15268201-15269200 Capsella rubella
Carub.0006s3382 1.0kb downstream 1.0kb downstream 2341 true scaffold_6: 15269201-15271541 Capsella rubella
Carub.0006s3382 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15270542-15271541 Capsella rubella
Carub.0006s3382 2.0kb upstream 2.0kb upstream 3341 true scaffold_6: 15267201-15270541 Capsella rubella
Carub.0006s3382 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15267201-15269200 Capsella rubella
Carub.0006s3382 2.0kb downstream 2.0kb downstream 3341 true scaffold_6: 15269201-15272541 Capsella rubella
Carub.0006s3382 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15270542-15272541 Capsella rubella
Carub.0006s3382 5.0kb upstream 5.0kb upstream 6341 true scaffold_6: 15264201-15270541 Capsella rubella
Carub.0006s3382 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15264201-15269200 Capsella rubella
Carub.0006s3382 5.0kb downstream 5.0kb downstream 6341 true scaffold_6: 15269201-15275541 Capsella rubella
Carub.0006s3382 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15270542-15275541 Capsella rubella
Carub.0006s3382 10.0kb upstream 10.0kb upstream 11341 true scaffold_6: 15259201-15270541 Capsella rubella
Carub.0006s3382 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15259201-15269200 Capsella rubella
Carub.0006s3382 10.0kb downstream 10.0kb downstream 11341 true scaffold_6: 15269201-15280541 Capsella rubella
Carub.0006s3382 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15270542-15280541 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375342 5261 Brassicaceae View MSA
123840104 5264 Brassicales-Malvales View MSA
124346836 5266 SBM View MSA
124239938 5268 Malvidae View MSA
124065709 5270 Rosid View MSA
123738900 5271 Pentapetalae View MSA
122786568 5272 Eudicot View MSA
122048481 5273 Angiosperm View MSA
121346904 5274 Embryophyte View MSA
123425316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain